Detailed information of amic_s0026.g33.t1 in Acropora microphthalma

Genomic Location: sc0000026_pilon:655796...684889
NR annotation: XP_044165687.1, LOW QUALITY PROTEIN: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6RUU0Pentraxin-4 OS=Mus musculus OX=10090 GN=Ptx4 PE=1 SV=2
P82279Protein crumbs homolog 1 OS=Homo sapiens OX=9606 GN=CRB1 PE=1 SV=2
Q96A99Pentraxin-4 OS=Homo sapiens OX=9606 GN=PTX4 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07699Ephrin_rec_likeTyrosine-protein kinase ephrin type A/B receptor-like DomainInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF00354PentaxinPentaxin familyDomainInterproscan
PF02494HYRHYR domainDomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR000436DomainSushi/SCR/CCP domainInterproscan
IPR003410DomainHYR domainInterproscan
IPR011641DomainTyrosine-protein kinase ephrin type A/B receptor-likeInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR001759FamilyPentraxin-relatedInterproscan
IPR035976Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR051355FamilyNotch and Slit guidance proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45836SLIT HOMOLOGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007411Biological Processaxon guidanceInterproscan
GO:0008201Molecular Functionheparin bindingInterproscan
GO:0048495Molecular FunctionRoundabout bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K22023MUC6_19; mucin-6/19-Membrane traffickingko04131deepkoala

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