Detailed information of amic_s0027.g41.t1 in Acropora microphthalma

Genomic Location: sc0000027_pilon:751895...754968
NR annotation: XP_015759864.1, PREDICTED: tigger transposable element-derived protein 4-like [Acropora digitifera]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6NT04Tigger transposable element-derived protein 7 OS=Homo sapiens OX=9606 GN=TIGD7 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000106 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03221
all species →		HTH_Tnp_Tc5Tc5 transposase DNA-binding domainDomainInterproscan
PF04218
all species →		CENP-B_NCENP-B N-terminal DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006600
all species →		DomainHTH CenpB-type DNA-binding domainInterproscan
IPR009057
all species →		Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR050863
all species →		FamilyCentromere and Transposable Element-Derived ProteinInterproscan
IPR007889
all species →		DomainDNA binding HTH domain, Psq-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19303
all species →		TRANSPOSONInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0027.g41.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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