Detailed information of amic_s0028.g51.t1 in Acropora microphthalma

Genomic Location: sc0000028_pilon:1485446...1507034
NR annotation: XP_029198804.2, long-chain-fatty-acid--CoA ligase 1-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9JID6Long-chain-fatty-acid--CoA ligase 1 OS=Cavia porcellus OX=10141 GN=ACSL1 PE=2 SV=1
Q9UKU0Long-chain-fatty-acid--CoA ligase 6 OS=Homo sapiens OX=9606 GN=ACSL6 PE=1 SV=4
P33124Long-chain-fatty-acid--CoA ligase 6 OS=Rattus norvegicus OX=10116 GN=Acsl6 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000650 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13193
all species →		AMP-binding_CAMP-binding enzyme C-terminal domainDomainInterproscan
PF00501
all species →		AMP-bindingAMP-binding enzymeFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR042099
all species →		Homologous_superfamilyANL, N-terminal domainInterproscan
IPR045851
all species →		Homologous_superfamilyAMP-binding enzyme, C-terminal domain superfamilyInterproscan
IPR025110
all species →		DomainAMP-binding enzyme, C-terminal domainInterproscan
IPR000873
all species →		DomainAMP-dependent synthetase/ligase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43272
all species →		LONG-CHAIN-FATTY-ACID--COA LIGASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0001676
all species →		Biological Processlong-chain fatty acid metabolic processInterproscan
GO:0004467
all species →		Molecular Functionlong-chain fatty acid-CoA ligase activityInterproscan
GO:0005783
all species →		Cellular Componentendoplasmic reticulumInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0028.g51.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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