Detailed information of amic_s0029.g21.t1 in Acropora microphthalma

Genomic Location: sc0000029_pilon:372247...373325
NR annotation: XP_015766270.1, PREDICTED: probable steroid-binding protein 3 [Acropora digitifera]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9FVZ9Membrane steroid-binding protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=MSBP2 PE=2 SV=1
Q9FVZ7Membrane steroid-binding protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=MSBP1 PE=1 SV=1
Q9M2Z4Membrane steroid-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=MSBP2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010678 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00173
all species →		Cyt-b5Cytochrome b5-like Heme/Steroid binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001199
all species →		DomainCytochrome b5-like heme/steroid binding domainInterproscan
IPR036400
all species →		Homologous_superfamilyCytochrome b5-like heme/steroid binding domain superfamilyInterproscan
IPR050577
all species →		FamilyCytochrome b5/MAPR and VMP1 familiesInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10281
all species →		MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0012505
all species →		Cellular Componentendomembrane systemInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0029.g21.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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