Detailed information of amic_s0029.g25.t1 in Acropora microphthalma

Genomic Location: sc0000029_pilon:490931...503759
NR annotation: XP_044177917.1, zinc finger MYND domain-containing protein 12-like isoform X2 [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9H0C1Zinc finger MYND domain-containing protein 12 OS=Homo sapiens OX=9606 GN=ZMYND12 PE=1 SV=3
Q7TS68tRNA (cytosine(72)-C(5))-methyltransferase NSUN6 OS=Mus musculus OX=10090 GN=Nsun6 PE=2 SV=2
Q8TEA1tRNA (cytosine(72)-C(5))-methyltransferase NSUN6 OS=Homo sapiens OX=9606 GN=NSUN6 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007204 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01189
all species →		Methyltr_RsmB-F16S rRNA methyltransferase RsmB/FFamilyInterproscan
PF13424
all species →		TPR_12Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036974
all species →		Homologous_superfamilyPUA domain superfamilyInterproscan
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR015947
all species →		Homologous_superfamilyPUA-like superfamilyInterproscan
IPR029063
all species →		Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR019734
all species →		RepeatTetratricopeptide repeatInterproscan
IPR053248
all species →		FamilyZinc finger MYND domain-containing proteinInterproscan
IPR049560
all species →		DomainSAM-dependent methyltransferase RsmB-F/NOP2-type, catalytic coreInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46533
all species →		ZINC FINGER MYND DOMAIN-CONTAINING PROTEIN 12Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0029.g25.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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