Detailed information of amic_s0029.g62.t1 in Acropora microphthalma

Genomic Location: sc0000029_pilon:933937...942031
NR annotation: XP_015768226.1, PREDICTED: prolyl 4-hydroxylase subunit alpha-1-like isoform X2 [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000555 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08336
all species →		P4Ha_NProlyl 4-Hydroxylase alpha-subunit, N-terminal regionFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013547
all species →		DomainProlyl 4-hydroxylase alpha-subunit, N-terminalInterproscan
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan

 PANTHER
No PANTHER signature was detected for amic_s0029.g62.t1. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0004656
all species →		Molecular Functionprocollagen-proline 4-dioxygenase activityInterproscan
GO:0005783
all species →		Cellular Componentendoplasmic reticulumInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0029.g62.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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