Gene detail

Detailed information of amic_s0030.g15.t1 in Acropora microphthalma

Genomic Location: sc0000030_pilon:256126...262898
NR annotation: XP_015749618.1, PREDICTED: cell division cycle protein 20 homolog [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q62623	Cell division cycle protein 20 homolog OS=Rattus norvegicus OX=10116 GN=Cdc20 PE=1 SV=2
Q9JJ66	Cell division cycle protein 20 homolog OS=Mus musculus OX=10090 GN=Cdc20 PE=1 SV=2
Q12834	Cell division cycle protein 20 homolog OS=Homo sapiens OX=9606 GN=CDC20 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001242 (this species only)
Ubiquitin family	UBD\|Other\|Beta-prp · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|DWD · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12894 all species →	ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	Repeat	Interproscan
PF00400 all species →	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR024977 all species →	Domain	Anaphase-promoting complex subunit 4-like, WD40 domain	Interproscan
IPR001680 all species →	Repeat	WD40 repeat	Interproscan
IPR033010 all species →	Family	WD repeat Cdc20/Fizzy	Interproscan
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19918 all species →	CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005680 all species →	Cellular Component	anaphase-promoting complex	Interproscan
GO:0010997 all species →	Molecular Function	anaphase-promoting complex binding	Interproscan
GO:0031145 all species →	Biological Process	anaphase-promoting complex-dependent catabolic process	Interproscan
GO:0097027 all species →	Molecular Function	ubiquitin-protein transferase activator activity	Interproscan
GO:1904668 all species →	Biological Process	positive regulation of ubiquitin protein ligase activity	Interproscan
GO:1905786 all species →	Biological Process	positive regulation of anaphase-promoting complex-dependent catabolic process	Interproscan
GO:1990757 all species →	Molecular Function	ubiquitin ligase activator activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03363	CDC20; cell division cycle 20, cofactor of APC complex	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.