Detailed information of amic_s0030.g19.t1 in Acropora microphthalma

Genomic Location: sc0000030_pilon:306487...322855
NR annotation: XP_020631552.1, muscleblind-like protein 2 isoform X8 [Orbicella faveolata]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6Q2B2Muscleblind-like protein 2a OS=Takifugu rubripes OX=31033 GN=mbnl2a PE=2 SV=1
Q5VZF2Muscleblind-like protein 2 OS=Homo sapiens OX=9606 GN=MBNL2 PE=1 SV=2
Q5R4F5Muscleblind-like protein 2 OS=Pongo abelii OX=9601 GN=MBNL2 PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002234 (this species only)
Transcription factor familyzf-CCCH · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14608
all species →		zf-CCCH_2RNA-binding, Nab2-type zinc fingerDomainInterproscan
PF00642
all species →		zf-CCCHZinc finger C-x8-C-x5-C-x3-H type (and similar)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000571
all species →		DomainZinc finger, CCCH-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12675
all species →		MUSCLEBLIND-LIKE PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0043484
all species →		Biological Processregulation of RNA splicingInterproscan
GO:0046872
all species →		Molecular Functionmetal ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K14943MBNL; muscleblind-Spliceosomeko03041deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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