Gene detail

Detailed information of amic_s0030.g23.t1 in Acropora microphthalma

Genomic Location: sc0000030_pilon:368638...382265
NR annotation: XP_044180131.1, glycerol kinase-like [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

amic_s0030.g23.t1

GAAAAATGGAAAATGAAAGCCCGTAAAATCACTTTCCTCATTCAGAATTTCGCAAACTAAGCGCTCCCGTGTCCTCCCGCAACTATTCCCGCCAAACGATGTCCGTGTTAGTTATTAGATACACAAGCGTGCCGATGACCTTAACGAGCGCTTGAGGCCCGAAAAAAAAACTTGCCCTCCATATAAAGCGATTTCTAGCTTTACTAATCCTTCTACAAGAGAAAAATTCCTTTTCTGTCAGCGAGTCATTGTAGATGAAATTACAACGATTTTGTTACACATTCTTGCGAAGTTGGAGATCTTCAAGAGCTTCACTGTCCAGCGGTTTCTGTCAACACACAGTTGTGAAGAAGAAGATGGAGTCAACAGACGATTTCAAAGACTTTGGACCTTTGGTTGGAGCGATAGATCAAGGCACATCGAGCAGTCGCTTTTTGCTGTTTGCAAGTAAGACTGCTGCCCTTCTAGCCTTTCACCAAATTGAGGTGAACAGTGTTTATCCCAAAGAAGGATGGGTAGAACAAGATCCAAAAGAGATTTTGTCATCTGTGTATTACTGCATGGAGCAAACCCTTCACAGCTGCAAAGACTTGAAAATAAACCCAGCTGATATTAAAGCTGTTGGGATCACAAATCAAAGAGAAACAACAGTAGTTTGGGACAAGATCACTGGGGAGCCACTGCACAATGCCATAATTTGGCTTGATACAAGAACAAAATCCACTGTTGATAATTTTGAGGCCAAGGTCCCGGAGTCAACAAGAGAGAAAGTCAGAAAATTGTGTGGCCTTCCAATCAATACTTACTTCAGCGCAGTTAAGCTAAGGTGGCTCATTGACCACTGCGAGGCAGTGAAGAAGGCAGTTGAAGAGGAGAGGTGTTTGTTTGGGACTGTGGACTCCTGGCTTATTTGGAATATGACTGGAGGACCAAATGGTGGCCTACACATCACAGATATCACAAATGCCTCAAGAACAATGTTCCTCAACCTTCAGACTCAAGCTTGGGATTCTTTCTTGTGCAAGTTCTTTGACATCCCCATGTCAGTCTTACCAACTGTGAAAAGTTCTTCAGAAATTTATGGGAAACTAGTGAGGAGTTTGTTACTTTTGTTAGTTTTTGGATCAGAAGTTGGAGGTCCACTGAATGGAGTACCAATATCAGGGTGTCTTGGTGACCAGCAAGCAGCTTTGGTTGGACAGCTATGCTTTAACCAAGGGGATGCCAAGAATACGTATGGAACTGGATGTTTCCTGTTATACAACACAGGAACTGAGGCAGTGGTCTCACAGCATGGTCTTTTGACAACAGTTGCATACAAACTTGGACCAGATCAACCGACAGTGTTTGCCTTGGAGGGTTCTGTTGCTATAACTGGAGCTGCTGTCAAATGGCTCAGGGATAACCTCAATGTTATTGGCAGTGCTTCTGAAATAGAAACTCTGGCTCGCAGTGTATCAAGTTCTGCTGGTGTCTATTTTGTGCCTGCTTTTTCTGGTCTCTATGCACCATATTGGCAAACAGATGCCAGAGGAGTCATCATTGGATTAACCCAATTTACCAACAAATCCCACTTAGCAAGGGCAACCCTTGAAGCAACTTGTTTCCAGACTAGAGAGCTTTTGGATGCAATGAACATGGACTGTGGTATCCCTCTGACATCTCTTCAAGTGGATGGTGGCATGACAGTGAATAATTTGTTGATGCAGTTGCAAGCTGACATTCTTGGAATTTCTGTGGTGCGTCCAACAATGCCGGAAACCACTGCTCTGGGTGCAGCCATGGCTGCTGGAATGGCCAAAGGCGTAGAGGTGTGGACATTGAACCTTCAGGACAAATCTCAAGTCAATACTGATGTGTTTGAGCCAGCAGTTGATCCTCATGAGCGTGACTTCCATTATGCAAGGTGGAAGAAGGCAGTTCAAAGAACAATGAAATGGGAAGTAACTAGCAATGAGAATGAAGGTCAACAAGAACCTCCATCTGGGATCCTAGGACCTGTCCTTTTCATATTTGGCAGTGTAGCACTTATTTTATTGGCCTCAAAGATCAGATAGCATACAATGAAATGAAATTAGGGTTTTTATGATTTATCAGGTATCAAATTGTAATAAACAAATGGAAGGGCTCAACAGGAGAAATATAGTTGGCTTTCTAGGTACTAACAGAATATACAGTGGTGTTGTGCACACCACGTGGAGCAGGCACTCTGTTTGAGTGCGTTCATGTAACCAACAAACAACTAATAATTATTTTTTACTGGATTGTTTTCTATGTGTGGGAAATAAACAATCTGCTTGTTGTTGTTTATGGCAAGGAAATAAAACAGAAACATTATCACATGGGGATCACAAAACCAGCCATTTTGTTTATCTCATTCAAATGCAACATGTGGAACTGGACTTCAATAATTTTTGTACCTTCAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q0IID9	Glycerol kinase OS=Bos taurus OX=9913 GN=GK PE=2 SV=1
P32189	Glycerol kinase OS=Homo sapiens OX=9606 GN=GK PE=1 SV=3
Q64516	Glycerol kinase OS=Mus musculus OX=10090 GN=Gk PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001349 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00370 all species →	FGGY_N	FGGY family of carbohydrate kinases, N-terminal domain	Domain	Interproscan
PF02782 all species →	FGGY_C	FGGY family of carbohydrate kinases, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018484 all species →	Domain	Carbohydrate kinase FGGY, N-terminal	Interproscan
IPR043129 all species →	Homologous_superfamily	ATPase, nucleotide binding domain	Interproscan
IPR018483 all species →	Conserved_site	Carbohydrate kinase, FGGY, conserved site	Interproscan
IPR018485 all species →	Domain	Carbohydrate kinase FGGY, C-terminal	Interproscan
IPR005999 all species →	Family	Glycerol kinase	Interproscan
IPR042018 all species →	Family	Glycerol kinase, metazoa	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10196 all species →	SUGAR KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005975 all species →	Biological Process	carbohydrate metabolic process	Interproscan
GO:0016301 all species →	Molecular Function	kinase activity	Interproscan
GO:0004370 all species →	Molecular Function	glycerol kinase activity	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0006071 all species →	Biological Process	glycerol metabolic process	Interproscan
GO:0006641 all species →	Biological Process	triglyceride metabolic process	Interproscan
GO:0016310 all species →	Biological Process	phosphorylation	Interproscan
GO:0046167 all species →	Biological Process	glycerol-3-phosphate biosynthetic process	Interproscan
GO:0016773 all species →	Molecular Function	phosphotransferase activity, alcohol group as acceptor	Interproscan
GO:0006072 all species →	Biological Process	glycerol-3-phosphate metabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00864	glpK, GK; glycerol kinase	EC:2.7.1.30	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.