Detailed information of amic_s0030.g42.t1 in Acropora microphthalma

Genomic Location: sc0000030_pilon:693360...722278
NR annotation: RUA04700.1, hypothetical protein DSY43_05905, partial [Gammaproteobacteria bacterium]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000039 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03372
all species →		Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036691
all species →		Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135
all species →		DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR004808
all species →		FamilyAP endonuclease 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22748
all species →		AP ENDONUCLEASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan
GO:0003906
all species →		Molecular FunctionDNA-(apurinic or apyrimidinic site) endonuclease activityInterproscan
GO:0004518
all species →		Molecular Functionnuclease activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006281
all species →		Biological ProcessDNA repairInterproscan
GO:0006284
all species →		Biological Processbase-excision repairInterproscan
GO:0008081
all species →		Molecular Functionphosphoric diester hydrolase activityInterproscan
GO:0008311
all species →		Molecular Functiondouble-stranded DNA 3'-5' DNA exonuclease activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0030.g42.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP