Detailed information of amic_s0030.g51.t1 in Acropora microphthalma

Genomic Location: sc0000030_pilon:785339...791947
NR annotation: XP_029184021.2, eukaryotic translation initiation factor 3 subunit F-like isoform X1 [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O00303Eukaryotic translation initiation factor 3 subunit F OS=Homo sapiens OX=9606 GN=EIF3F PE=1 SV=1
Q4R5B8Eukaryotic translation initiation factor 3 subunit F OS=Macaca fascicularis OX=9541 GN=EIF3F PE=2 SV=1
Q9DCH4Eukaryotic translation initiation factor 3 subunit F OS=Mus musculus OX=10090 GN=Eif3f PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005948 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01398
all species →		JABJAB1/Mov34/MPN/PAD-1 ubiquitin proteaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037518
all species →		DomainMPN domainInterproscan
IPR000555
all species →		DomainJAB1/MPN/MOV34 metalloenzyme domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10540
all species →		EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003743
all species →		Molecular Functiontranslation initiation factor activityInterproscan
GO:0006413
all species →		Biological Processtranslational initiationInterproscan
GO:0031369
all species →		Molecular Functiontranslation initiation factor bindingInterproscan
GO:0071541
all species →		Cellular Componenteukaryotic translation initiation factor 3 complex, eIF3mInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0008233
all species →		Molecular Functionpeptidase activityInterproscan
GO:0008237
all species →		Molecular Functionmetallopeptidase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0030.g51.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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