Gene detail

Detailed information of amic_s0031.g16.t1 in Acropora microphthalma

Genomic Location: sc0000031_pilon:263571...267165
NR annotation: XP_015752797.1, PREDICTED: eukaryotic translation initiation factor 1-like [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P51971	Eukaryotic translation initiation factor 1 OS=Gallus gallus OX=9031 GN=EIF1 PE=3 SV=2
O60739	Eukaryotic translation initiation factor 1b OS=Homo sapiens OX=9606 GN=EIF1B PE=1 SV=2
Q4R4X9	Eukaryotic translation initiation factor 1b OS=Macaca fascicularis OX=9541 GN=EIF1B PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008684 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01253 all species →	SUI1	Translation initiation factor SUI1	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005874 all species →	Family	Eukaryotic translation initiation factor SUI1	Interproscan
IPR036877 all species →	Homologous_superfamily	SUI1 domain superfamily	Interproscan
IPR001950 all species →	Domain	SUI1 domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10388 all species →	EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003743 all species →	Molecular Function	translation initiation factor activity	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0016282 all species →	Cellular Component	eukaryotic 43S preinitiation complex	Interproscan
GO:0043024 all species →	Molecular Function	ribosomal small subunit binding	Interproscan
GO:0006413 all species →	Biological Process	translational initiation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03113	EIF1, SUI1; translation initiation factor 1	-	Translation factors	ko03012	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.