Detailed information of amic_s0032.g38.t1 in Acropora microphthalma

Genomic Location: sc0000032_pilon:584301...590382
NR annotation: KXJ16219.1, ATP-dependent DNA helicase PIF1 [Exaiptasia diaphana]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7ZV90ATP-dependent DNA helicase PIF1 OS=Danio rerio OX=7955 GN=pif1 PE=2 SV=1
Q6MHJ5ATP-dependent DNA helicase Pif1 OS=Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIMB 9529 / HD100) OX=264462 GN=pif1 PE=1 SV=1
A5WFR0ATP-dependent DNA helicase Pif1 OS=Psychrobacter sp. (strain PRwf-1) OX=349106 GN=pif1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000098 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05970
all species →		PIF1PIF1-like helicaseFamilyInterproscan
PF21530
all species →		Pif1_2B_domDNA helicase Pif1, 2B domainDomainInterproscan
PF14214
all species →		Helitron_like_NHelitron helicase-like domain at N-terminusFamilyInterproscan
PF20209
all species →		DUF6570Domain of unknown function (DUF6570)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010285
all species →		FamilyDNA helicase Pif1-likeInterproscan
IPR049163
all species →		DomainDNA helicase Pif1-like, 2B domainInterproscan
IPR012340
all species →		Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR025476
all species →		DomainHelitron helicase-like domainInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR046700
all species →		DomainDomain of unknown function DUF6570Interproscan
IPR051055
all species →		FamilyPIF1 DNA helicaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47642
all species →		ATP-DEPENDENT DNA HELICASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000723
all species →		Biological Processtelomere maintenanceInterproscan
GO:0003678
all species →		Molecular FunctionDNA helicase activityInterproscan
GO:0006281
all species →		Biological ProcessDNA repairInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0032.g38.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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