Detailed information of amic_s0032.g42.t1 in Acropora microphthalma

Genomic Location: sc0000032_pilon:628631...641758
NR annotation: XP_015768462.1, PREDICTED: transmembrane and TPR repeat-containing protein 1-like [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8IUR5Protein O-mannosyl-transferase TMTC1 OS=Homo sapiens OX=9606 GN=TMTC1 PE=1 SV=3
Q3UV71Protein O-mannosyl-transferase TMTC1 OS=Mus musculus OX=10090 GN=Tmtc1 PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000850 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13432
all species →		TPR_16Tetratricopeptide repeatRepeatInterproscan
PF13424
all species →		TPR_12Tetratricopeptide repeatRepeatInterproscan
PF14559
all species →		TPR_19Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019734
all species →		RepeatTetratricopeptide repeatInterproscan
IPR052943
all species →		FamilyTMTC O-mannosyl-transferaseInterproscan
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44809
all species →		-Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0032.g42.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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