Detailed information of amic_s0033.g122.t2 in Acropora microphthalma

Genomic Location: sc0000033_pilon:1498728...1571972
NR annotation: XP_044179246.1, adhesion G protein-coupled receptor L3-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P02468Laminin subunit gamma-1 OS=Mus musculus OX=10090 GN=Lamc1 PE=1 SV=2
Q1LVF0Laminin subunit gamma-1 OS=Danio rerio OX=7955 GN=lamc1 PE=2 SV=2
P11047Laminin subunit gamma-1 OS=Homo sapiens OX=9606 GN=LAMC1 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001810 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01390
all species →
SEASEA domainFamilyInterproscan
PF16489
all species →
GAINGPCR-Autoproteolysis INducing (GAIN) domainDomainInterproscan
PF00059
all species →
Lectin_CLectin C-type domainDomainInterproscan
PF00053
all species →
Laminin_EGFLaminin EGF domainDomainInterproscan
PF00002
all species →
7tm_27 transmembrane receptor (Secretin family)FamilyInterproscan
PF00055
all species →
Laminin_NLaminin N-terminal (Domain VI)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007110
all species →
DomainImmunoglobulin-like domainInterproscan
IPR036445
all species →
Homologous_superfamilyGPCR family 2, extracellular hormone receptor domain superfamilyInterproscan
IPR032675
all species →
Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR002049
all species →
DomainLaminin-type EGF domainInterproscan
IPR008979
all species →
Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR000082
all species →
DomainSEA domainInterproscan
IPR016187
all species →
Homologous_superfamilyC-type lectin foldInterproscan
IPR017981
all species →
DomainGPCR, family 2-like, 7TMInterproscan
IPR036364
all species →
Homologous_superfamilySEA domain superfamilyInterproscan
IPR017983
all species →
Conserved_siteGPCR, family 2, secretin-like, conserved siteInterproscan
IPR001879
all species →
DomainGPCR, family 2, extracellular hormone receptor domainInterproscan
IPR013783
all species →
Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR050440
all species →
FamilyLaminin/Netrin Extracellular MatrixInterproscan
IPR032471
all species →
DomainGAIN domain, N-terminalInterproscan
IPR000372
all species →
DomainLeucine-rich repeat N-terminal domainInterproscan
IPR001304
all species →
DomainC-type lectin-likeInterproscan
IPR008211
all species →
DomainLaminin, N-terminalInterproscan
IPR000832
all species →
FamilyGPCR, family 2, secretin-likeInterproscan
IPR016186
all species →
Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR036179
all species →
Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR000742
all species →
DomainEGF-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10574
all species →
NETRIN/LAMININ-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004930
all species →
Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0004888
all species →
Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0007166
all species →
Biological Processcell surface receptor signaling pathwayInterproscan
GO:0007186
all species →
Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0005604
all species →
Cellular Componentbasement membraneInterproscan
GO:0009887
all species →
Biological Processanimal organ morphogenesisInterproscan
GO:0009888
all species →
Biological Processtissue developmentInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0033.g122.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP