Detailed information of amic_s0033.g14.t1 in Acropora microphthalma

Genomic Location: sc0000033_pilon:254553...259745
NR annotation: XP_015776851.1, PREDICTED: stomatin-4-like [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q27433Mechanosensory protein 2 OS=Caenorhabditis elegans OX=6239 GN=mec-2 PE=1 SV=1
Q22165Stomatin-4 OS=Caenorhabditis elegans OX=6239 GN=sto-4 PE=3 SV=2
Q19958Stomatin-2 OS=Caenorhabditis elegans OX=6239 GN=sto-2 PE=3 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000607 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01145
all species →		Band_7SPFH domain / Band 7 familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018080
all species →		Conserved_siteBand 7/stomatin-like, conserved siteInterproscan
IPR001972
all species →		FamilyStomatin/HflK familyInterproscan
IPR036013
all species →		Homologous_superfamilyBand 7/SPFH domain superfamilyInterproscan
IPR043202
all species →		FamilyBand-7 stomatin-likeInterproscan
IPR001107
all species →		DomainBand 7 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10264
all species →		BAND 7 PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0033.g14.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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