Detailed information of amic_s0033.g34.t1 in Acropora microphthalma

Genomic Location: sc0000033_pilon:519739...525407
NR annotation: XP_015753194.1, PREDICTED: queuine tRNA-ribosyltransferase-like isoform X1 [Acropora digitifera]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7SYK1Queuine tRNA-ribosyltransferase catalytic subunit 1 OS=Danio rerio OX=7955 GN=qtrt1 PE=2 SV=1
Q28HC6Queuine tRNA-ribosyltransferase catalytic subunit 1 OS=Xenopus tropicalis OX=8364 GN=qtrt1 PE=2 SV=2
Q4QQY7Queuine tRNA-ribosyltransferase catalytic subunit 1 OS=Xenopus laevis OX=8355 GN=qtrt1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003392 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01702
all species →		TGTQueuine tRNA-ribosyltransferaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036511
all species →		Homologous_superfamilyQueuine tRNA-ribosyltransferase-likeInterproscan
IPR002616
all species →		DomaintRNA-guanine(15) transglycosylase-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43530
all species →		QUEUINE TRNA-RIBOSYLTRANSFERASE CATALYTIC SUBUNIT 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0008479
all species →		Molecular FunctiontRNA-guanosine(34) queuine transglycosylase activityInterproscan
GO:0101030
all species →		Biological ProcesstRNA-guanine transglycosylationInterproscan
GO:0006400
all species →		Biological ProcesstRNA modificationInterproscan
GO:0016763
all species →		Molecular Functionpentosyltransferase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0033.g34.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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