Detailed information of amic_s0033.g49.t1 in Acropora microphthalma

Genomic Location: sc0000033_pilon:670829...672457
NR annotation: XP_015753213.1, PREDICTED: homeobox protein ceh-1-like [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P15858Homeobox protein H40 (Fragment) OS=Apis mellifera OX=7460 PE=4 SV=1
P22807Homeobox protein slou OS=Drosophila melanogaster OX=7227 GN=slou PE=2 SV=1
P19601Homeobox protein SAX-1 (Fragment) OS=Gallus gallus OX=9031 GN=SAX1 PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000082 (this species only)
Transcription factor familyHomeobox · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046
all species →		HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017970
all species →		Conserved_siteHomeobox, conserved siteInterproscan
IPR020479
all species →		DomainHomeobox domain, metazoaInterproscan
IPR001356
all species →		DomainHomeobox domainInterproscan
IPR050848
all species →		FamilyHomeobox domain-containing transcription factorsInterproscan
IPR009057
all species →		Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24333
all species →		HOMEO BOX HB9 LIKE A-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000981
all species →		Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0033.g49.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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