Detailed information of amic_s0034.g1.t1 in Acropora microphthalma

Genomic Location: sc0000034_pilon:634...13025
NR annotation: XP_020613995.1, uncharacterized protein LOC110052225 [Orbicella faveolata]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000786 (this species only)
Ubiquitin familyDUB|OTU|OTU · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02338
all species →
OTUOTU-like cysteine proteaseFamilyInterproscan
PF00646
all species →
F-boxF-box domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003323
all species →
DomainOTU domainInterproscan
IPR039598
all species →
FamilyHMG domain-containing protein 3Interproscan
IPR013087
all species →
DomainZinc finger C2H2-typeInterproscan
IPR038765
all species →
Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR036047
all species →
Homologous_superfamilyF-box-like domain superfamilyInterproscan
IPR001810
all species →
DomainF-box domainInterproscan
IPR036236
all species →
Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR17609
all species →
HMG DOMAIN-CONTAINING PROTEIN 3Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0034.g1.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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