Detailed information of amic_s0035.g66.t1 in Acropora microphthalma

Genomic Location: sc0000035_pilon:1144441...1148765
NR annotation: XP_029180830.1, calponin-1-like [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q32L92Calponin-3 OS=Bos taurus OX=9913 GN=CNN3 PE=2 SV=1
Q9DAW9Calponin-3 OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=1
P37397Calponin-3 OS=Rattus norvegicus OX=10116 GN=Cnn3 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000602 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00307
all species →		CHCalponin homology (CH) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001715
all species →		DomainCalponin homology domainInterproscan
IPR036872
all species →		Homologous_superfamilyCH domain superfamilyInterproscan
IPR050606
all species →		FamilyCalponin-likeInterproscan
IPR003096
all species →		FamilySmooth muscle protein/calponinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47385
all species →		CALPONINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0007015
all species →		Biological Processactin filament organizationInterproscan
GO:0015629
all species →		Cellular Componentactin cytoskeletonInterproscan
GO:0051015
all species →		Molecular Functionactin filament bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0035.g66.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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