Detailed information of amic_s0035.g7.t1 in Acropora microphthalma

Genomic Location: sc0000035_pilon:248466...254867
NR annotation: XP_044170421.1, uncharacterized protein LOC114959683 [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000186 (this species only)
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|CDC20 · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400
all species →		WD40WD domain, G-beta repeatRepeatInterproscan
PF18738
all species →		HEPN_DZIP3DZIP3/ hRUL138-like HEPNDomainInterproscan
PF13191
all species →		AAA_16AAA ATPase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680
all species →		RepeatWD40 repeatInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR007111
all species →		DomainNACHT nucleoside triphosphataseInterproscan
IPR036322
all species →		Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR041249
all species →		DomainDZIP3-like HEPN domainInterproscan
IPR011045
all species →		Homologous_superfamilyNitrous oxide reductase, N-terminalInterproscan
IPR041664
all species →		DomainOrc1-like, AAA ATPase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10039
all species →		AMELOGENINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0035.g7.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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