Detailed information of amic_s0036.g41.t2 in Acropora microphthalma

Genomic Location: sc0000036_pilon:1128681...1158555
NR annotation: XP_015772584.1, PREDICTED: muscle, skeletal receptor tyrosine protein kinase-like isoform X1 [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A4QP81Putative ferric-chelate reductase 1 OS=Danio rerio OX=7955 GN=frrs1 PE=2 SV=1
Q8K480Membrane frizzled-related protein OS=Mus musculus OX=10090 GN=Mfrp PE=1 SV=1
Q62381Tolloid-like protein 1 OS=Mus musculus OX=10090 GN=Tll1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008142 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03188
all species →		Cytochrom_B561Eukaryotic cytochrome b561FamilyInterproscan
PF13927
all species →		Ig_3Immunoglobulin domainDomainInterproscan
PF07679
all species →		I-setImmunoglobulin I-set domainDomainInterproscan
PF00431
all species →		CUBCUB domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007110
all species →		DomainImmunoglobulin-like domainInterproscan
IPR006593
all species →		DomainCytochrome b561/ferric reductase transmembraneInterproscan
IPR000859
all species →		DomainCUB domainInterproscan
IPR003599
all species →		DomainImmunoglobulin subtypeInterproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR035914
all species →		Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan
IPR013098
all species →		DomainImmunoglobulin I-setInterproscan
IPR036179
all species →		Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR050841
all species →		FamilyDevelopmental metalloproteases and endocytic receptorsInterproscan
IPR003598
all species →		DomainImmunoglobulin subtype 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24251
all species →		OVOCHYMASE-RELATEDInterproscan

 Gene Ontology
No Gene Ontology signature was detected for amic_s0036.g41.t2. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0036.g41.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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