Gene detail

Detailed information of amic_s0037.g14.t1 in Acropora microphthalma

Genomic Location: sc0000037_pilon:259630...284755
NR annotation: XP_029192981.2, condensin-2 complex subunit G2-like [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

amic_s0037.g14.t1

ATGTTACTTCCTGAAGAGGCAAAAGCTTTACAAAACAACATTTCTCAACTCTGTGAGCTTTGGATTGTCAATGACTTATCAGGGAAAGAAGAATTAGTGACAAACACAGTGCCATTTGTCATTATCCGAAGTCTTGGCAGAGGAACTGTCGCAGATGTGAAATGTGTTTGGAGCTTGCGCCAGTGTCTTCTGGTGATAGATTTTGAAGACAACTCTTCAGGCTCTTTGAAACAAGTTCTTCACCAGTGCATGATCCACCCTATGTACCTGAAGTTGGAAGAGGGGAGACGCTTTCTCAGCTTTTTGTTTGGTCTAAATCCTGAATTGTCCAAAGAGTTTCACAAGACAATCAAGAATCAGATTCCATATTGCGCTGTGAATTCCCTGCGGCTGTATGGGGAGGTGTACTTCCGAGCTTGGAGAGTTGCCTCAGGCGTATACTTAAAGGTGCTGGAAGAAAACTGCATTCAAGATCTGATGTATTGCGCTGTACATGCACAACGAACTGGAACTCAGTCCATGGCATCCAGACTGAGAAAGGTTTTGGAATACTTTCATAAGCAGAAAAAGCAAAGAGGTGTAGACGAAGCCCTCCTTCGATTGTATCAACCAATCATATGGAGGGCCTTTAAGGCTGCAAATCCTATGGTTAGAGCCAACGCTGCAGCTCTGTTGACAGATACATTTCCCCTGCAAAATCCAGATGCAGGAAATGAAGAGATAGATGCTTTGCTGCAGACACAATTTGATATTCTGAAAAACCTGCTTGAGGATCCATGCCCCACAGTAAGAGCCACTGCCATCCATGGTGTTTGTCGTGTTACAGGTGTATTCTGGGAACTCATTCCAGCCCACGTCATCAAAATGTTCCTCACAACACTGATAACTGAGTTAGCATTTGATACTTCTTCAAGTGCTGTCAGAGTTGCTGTGTTTCAGGGTTTAAAGGTCTTGCTGGATAATCGTCTTAGTCACCCTCTTCTGAAGACATTGCTTGTTCATCTACAAGACTTGGTGCATGACTCATCTGAGAAAGTTCGCATCGCGTTTCTCGATGTCTTGCTTTTTGTTAAAGGCTTGAAGGCTATCAAGTTTTGGAACATAGTACCACTGGAGCAGCTACTCTGTCAGCTGGAGGTTGAGCAATCTGCGTCTGTTACCAGGAGGCTCGTTAAGCTACTTGTGAATTCATTTCATCCGACGAGCAAAGGCCCTGATATCCAGGTTTCACGCTGTTTAGCCCTTTGGAAATCCAATCCTGTGGCGTCCAGAAAGTTTTACCAGTATGTGCATCTACACTCGACGCTCTCAGCAACAGGCAAGTTTATGTTATTTCTTTGCCAATATTTGGTGAAGTTTGCAAAAAGAGAGGGTGATGAAAACACTCAGTCTTTTGAGAGTGAGGACAACGAAGAAAGCATCTCCTCTGCTGAAGACAAGGAAAATGCAGAAAATTTGGAAGACAATTCAGACGCTTGTGATGTTGAAGTGATCGCTGGGTTGGTCGAGACCATTGCTATTTGTTGGGGAGGAATCAAAGATAAACTAGACCAGAATGCTAATGAAGCAACCAAAACAAAATTGGTGGAGAAGTTCTCGAAGGCTCTTCCAAAGCTGTTTGGATCAATTACACATCCTCGTGTGCAGGGAGCTTGTTTGGTGATCGCGGGCTTCTTACCTTCATCGGCTTTACCAGCTTTCAGTGCTAAATGTTTGTCCTCGCTTTTTTCGCTGCCTGCCACTGCATTGAGTACAGAGTATGGTCCACTGCTGAATTGTCTGTGTGCGTGGAACCAGGTGACTGAAGTACTTCAGCTTATTGAAGAACGAATCAGTGCTGGTATGAGTGGAACCTCGAAAAGTTCAAGAATGGAAGAAGGAAAAAAACGAAAGAAGAAATCTGTGACCTTTCAGCTACCTTTGGAGAATAAACACACATTGTCCCTCAGCTTCCTTTCATGGCTTATGAGTGAACCAACCTGCCGTACTGCTGTTCAAGAGCGCAGTGACAAATTGCGACAGATTGCAGTTAGTTTGCGGCTGATAATGGCAACTATTGAATCGCGTCTCGCATCAAGGGAGTCTCCTCTTGCGAGTGTGTCTCCGAGTGATGAAGAGTTCTTCCAGAAAGCATTTCAGGCCTACTGCCTGATAGAGATTCATTTGCATCATATGGAAAAGAACGAGGAACATGGCGGAGCTATGGTGGCCTTAGAATATGTCCTAGTTTGGGCTGACAGAGTATTACTACCGGCTATGAATGGGAACTTCCCAGTCCCATTAATTAAGTCAGGAAATACTTCCAAGAGATTGCACGACGAATCACAGAAATCCAGCTGTCTGATTGAGGAACTTGTCAAGATAATTTTGATCTGTTTGAGTGAGACGACTTTGCTTGGAATTGCACAAGAAAAGTTTTACAACCAGGCAGCAGTTTTTACGACCTCGCTGGCTAATCTTGGTTACAAAGCGGTGGAGTTTCTGCCTCAGCTTGCTAAACTGGTTTACCAAGTTGCACACAGCATCCTCTTTAGCGACGTCTGTGCGACAAATGTCCATCTCCGAGGCGGCCCTGTTTCGATTATCCTACAAAATCTGCTGCAAATCCTTTCGTCGTGTGACACGCCAGAGGTCGATGTTTTACCCCAGGCCCTTCAAGCGGTCCGCCCAGCTCTTTCCGAGGTTCTTTTGCTAACAGAGGTGTGGAAACGACGCTCTGGAGCAAATCTCAGCCTTATGTCGCCATTACTCTCTGCTGTCGTCACTAACATCAAACAACAGATCTCGACCGCGGGCGAAGAAACCAGCGAGGATGCGTTGCCGATGGTAGCTGCATTTTTGGTTAAATTGATCACAAGTTCACAAGCTCTCCTAAGATCTTTCATGTCTGAATTGAAGAAACAAGTTCTATCGGGAGAACTTAGTGACGCTGTTGATACAAAGGCCTCAGTTGCAAGACTCCTTGCAGCATTGCACGGGTTTGCCGACGCAAGCATTATTAAGACATGCGCACTGCAAATAGCTGAGTGGCCAAACGGTTCAGATGCGCAAACAAGCGAAGACGTGAAAGAAGCCCAAGCTGTTATTCAGAAGATGCTTGTCAAGTTAGAGATCGTCGTTTAA

Transcript

amic_s0037.g14.t1

AAAAAGAGCGCGCTTTTGATCGAAAGAGTTGTTTTGTTTATGTCGGCATTATGGCTACAAATTTGCGTGAAGATTTCCTTAAATCTGTAAAGGAGGATTCTCCAGCGGCGTTTCTCCGTCTTATAGAACAGCACAACTCAAGAAATGAGTCCTTTGATGTTGGAGAGTTGCTACAGACCTTGCCCAAAAAGGACCATGAAAGCTTGTGGACTGGACTCCGTGATATGACACAAAGGCTGATTTTAGCCAATCCACTCTCATCACAGGGCAATGTTGACTTGCAGGACGAACATCAATCATGTCAATGGTCAGCTCTGTTGTCATTTCTTGAAGGTGTAACAACAGTTGCTCTGTGCGCTTTAGCCACCGCAGAGAAAACTACCCAGTCTCCAGCGCCATTTTTAGAGACTGCCATTATTCTTCATGGTCTGTTGATGTTACTTCCTGAAGAGGCAAAAGCTTTACAAAACAACATTTCTCAACTCTGTGAGCTTTGGATTGTCAATGACTTATCAGGGAAAGAAGAATTAGTGACAAACACAGTGCCATTTGTCATTATCCGAAGTCTTGGCAGAGGAACTGTCGCAGATGTGAAATGTGTTTGGAGCTTGCGCCAGTGTCTTCTGGTGATAGATTTTGAAGACAACTCTTCAGGCTCTTTGAAACAAGTTCTTCACCAGTGCATGATCCACCCTATGTACCTGAAGTTGGAAGAGGGGAGACGCTTTCTCAGCTTTTTGTTTGGTCTAAATCCTGAATTGTCCAAAGAGTTTCACAAGACAATCAAGAATCAGATTCCATATTGCGCTGTGAATTCCCTGCGGCTGTATGGGGAGGTGTACTTCCGAGCTTGGAGAGTTGCCTCAGGCGTATACTTAAAGGTGCTGGAAGAAAACTGCATTCAAGATCTGATGTATTGCGCTGTACATGCACAACGAACTGGAACTCAGTCCATGGCATCCAGACTGAGAAAGGTTTTGGAATACTTTCATAAGCAGAAAAAGCAAAGAGGTGTAGACGAAGCCCTCCTTCGATTGTATCAACCAATCATATGGAGGGCCTTTAAGGCTGCAAATCCTATGGTTAGAGCCAACGCTGCAGCTCTGTTGACAGATACATTTCCCCTGCAAAATCCAGATGCAGGAAATGAAGAGATAGATGCTTTGCTGCAGACACAATTTGATATTCTGAAAAACCTGCTTGAGGATCCATGCCCCACAGTAAGAGCCACTGCCATCCATGGTGTTTGTCGTGTTACAGGTGTATTCTGGGAACTCATTCCAGCCCACGTCATCAAAATGTTCCTCACAACACTGATAACTGAGTTAGCATTTGATACTTCTTCAAGTGCTGTCAGAGTTGCTGTGTTTCAGGGTTTAAAGGTCTTGCTGGATAATCGTCTTAGTCACCCTCTTCTGAAGACATTGCTTGTTCATCTACAAGACTTGGTGCATGACTCATCTGAGAAAGTTCGCATCGCGTTTCTCGATGTCTTGCTTTTTGTTAAAGGCTTGAAGGCTATCAAGTTTTGGAACATAGTACCACTGGAGCAGCTACTCTGTCAGCTGGAGGTTGAGCAATCTGCGTCTGTTACCAGGAGGCTCGTTAAGCTACTTGTGAATTCATTTCATCCGACGAGCAAAGGCCCTGATATCCAGGTTTCACGCTGTTTAGCCCTTTGGAAATCCAATCCTGTGGCGTCCAGAAAGTTTTACCAGTATGTGCATCTACACTCGACGCTCTCAGCAACAGGCAAGTTTATGTTATTTCTTTGCCAATATTTGGTGAAGTTTGCAAAAAGAGAGGGTGATGAAAACACTCAGTCTTTTGAGAGTGAGGACAACGAAGAAAGCATCTCCTCTGCTGAAGACAAGGAAAATGCAGAAAATTTGGAAGACAATTCAGACGCTTGTGATGTTGAAGTGATCGCTGGGTTGGTCGAGACCATTGCTATTTGTTGGGGAGGAATCAAAGATAAACTAGACCAGAATGCTAATGAAGCAACCAAAACAAAATTGGTGGAGAAGTTCTCGAAGGCTCTTCCAAAGCTGTTTGGATCAATTACACATCCTCGTGTGCAGGGAGCTTGTTTGGTGATCGCGGGCTTCTTACCTTCATCGGCTTTACCAGCTTTCAGTGCTAAATGTTTGTCCTCGCTTTTTTCGCTGCCTGCCACTGCATTGAGTACAGAGTATGGTCCACTGCTGAATTGTCTGTGTGCGTGGAACCAGGTGACTGAAGTACTTCAGCTTATTGAAGAACGAATCAGTGCTGGTATGAGTGGAACCTCGAAAAGTTCAAGAATGGAAGAAGGAAAAAAACGAAAGAAGAAATCTGTGACCTTTCAGCTACCTTTGGAGAATAAACACACATTGTCCCTCAGCTTCCTTTCATGGCTTATGAGTGAACCAACCTGCCGTACTGCTGTTCAAGAGCGCAGTGACAAATTGCGACAGATTGCAGTTAGTTTGCGGCTGATAATGGCAACTATTGAATCGCGTCTCGCATCAAGGGAGTCTCCTCTTGCGAGTGTGTCTCCGAGTGATGAAGAGTTCTTCCAGAAAGCATTTCAGGCCTACTGCCTGATAGAGATTCATTTGCATCATATGGAAAAGAACGAGGAACATGGCGGAGCTATGGTGGCCTTAGAATATGTCCTAGTTTGGGCTGACAGAGTATTACTACCGGCTATGAATGGGAACTTCCCAGTCCCATTAATTAAGTCAGGAAATACTTCCAAGAGATTGCACGACGAATCACAGAAATCCAGCTGTCTGATTGAGGAACTTGTCAAGATAATTTTGATCTGTTTGAGTGAGACGACTTTGCTTGGAATTGCACAAGAAAAGTTTTACAACCAGGCAGCAGTTTTTACGACCTCGCTGGCTAATCTTGGTTACAAAGCGGTGGAGTTTCTGCCTCAGCTTGCTAAACTGGTTTACCAAGTTGCACACAGCATCCTCTTTAGCGACGTCTGTGCGACAAATGTCCATCTCCGAGGCGGCCCTGTTTCGATTATCCTACAAAATCTGCTGCAAATCCTTTCGTCGTGTGACACGCCAGAGGTCGATGTTTTACCCCAGGCCCTTCAAGCGGTCCGCCCAGCTCTTTCCGAGGTTCTTTTGCTAACAGAGGTGTGGAAACGACGCTCTGGAGCAAATCTCAGCCTTATGTCGCCATTACTCTCTGCTGTCGTCACTAACATCAAACAACAGATCTCGACCGCGGGCGAAGAAACCAGCGAGGATGCGTTGCCGATGGTAGCTGCATTTTTGGTTAAATTGATCACAAGTTCACAAGCTCTCCTAAGATCTTTCATGTCTGAATTGAAGAAACAAGTTCTATCGGGAGAACTTAGTGACGCTGTTGATACAAAGGCCTCAGTTGCAAGACTCCTTGCAGCATTGCACGGGTTTGCCGACGCAAGCATTATTAAGACATGCGCACTGCAAATAGCTGAGTGGCCAAACGGTTCAGATGCGCAAACAAGCGAAGACGTGAAAGAAGCCCAAGCTGTTATTCAGAAGATGCTTGTCAAGTTAGAGATCGTCGTTTAAAGCATTTGGACAAATAACGTAGTAAATACAAACAAACAAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q2TAW0	Condensin-2 complex subunit G2 OS=Xenopus laevis OX=8355 GN=ncapg2 PE=1 SV=1
Q6DFV1	Condensin-2 complex subunit G2 OS=Mus musculus OX=10090 GN=Ncapg2 PE=1 SV=2
Q86XI2	Condensin-2 complex subunit G2 OS=Homo sapiens OX=9606 GN=NCAPG2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005506 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12422 all species →	Condensin2nSMC	Condensin II non structural maintenance of chromosomes subunit	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR024741 all species →	Family	Condensin-2 complex subunit G2	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16199 all species →	CONDENSIN-2 COMPLEX SUBUNIT G2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000070 all species →	Biological Process	mitotic sister chromatid segregation	Interproscan
GO:0000796 all species →	Cellular Component	condensin complex	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11492	NCAPG2, LUZP5; condensin-2 complex subunit G2	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.