Detailed information of amic_s0037.g42.t1 in Acropora microphthalma

Genomic Location: sc0000037_pilon:761618...777412
NR annotation: XP_015776139.1, PREDICTED: protein SMG8-like [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q0VA04Nonsense-mediated mRNA decay factor SMG8 OS=Xenopus tropicalis OX=8364 GN=smg8 PE=2 SV=1
B0W730Nonsense-mediated mRNA decay factor SMG8 OS=Culex quinquefasciatus OX=7176 GN=CPIJ003128 PE=3 SV=1
Q17G65Nonsense-mediated mRNA decay factor SMG8 OS=Aedes aegypti OX=7159 GN=AAEL003157 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005096 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10220
all species →		Smg8_Smg9Smg8_Smg9 FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019354
all species →		FamilyNonsense-mediated mRNA decay factor SMG8-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13091
all species →		AMPLIFIED IN BREAST CANCER 2-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000184
all species →		Biological Processnuclear-transcribed mRNA catabolic process, nonsense-mediated decayInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0037.g42.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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