Detailed information of amic_s0037.g89.t1 in Acropora microphthalma

Genomic Location: sc0000037_pilon:1295406...1344212
NR annotation: XP_044171025.1, eukaryotic translation initiation factor 4 gamma 3-like isoform X1 [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q04637Eukaryotic translation initiation factor 4 gamma 1 OS=Homo sapiens OX=9606 GN=EIF4G1 PE=1 SV=4
Q6NZJ6Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1
Q80XI3Eukaryotic translation initiation factor 4 gamma 3 OS=Mus musculus OX=10090 GN=Eif4g3 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001108 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02854
all species →		MIF4GMIF4G domainRepeatInterproscan
PF02847
all species →		MA3MA3 domainRepeatInterproscan
PF20706
all species →		GT4-conflictFamily 4 Glycosyltransferase in conflict systemsFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003307
all species →		DomainW2 domainInterproscan
IPR003890
all species →		DomainMIF4G-like, type 3Interproscan
IPR003891
all species →		DomainInitiation factor eIF-4 gamma, MA3Interproscan
IPR016024
all species →		Homologous_superfamilyArmadillo-type foldInterproscan
IPR045208
all species →		FamilyInitiation factor 4GInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23253
all species →		EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0003729
all species →		Molecular FunctionmRNA bindingInterproscan
GO:0003743
all species →		Molecular Functiontranslation initiation factor activityInterproscan
GO:0016281
all species →		Cellular Componenteukaryotic translation initiation factor 4F complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0037.g89.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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