Detailed information of amic_s0038.g27.t2 in Acropora microphthalma

Genomic Location: sc0000038_pilon:512974...516197
NR annotation: PFX33353.1, Arylsulfatase B [Stylophora pistillata]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000155 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03221
all species →		HTH_Tnp_Tc5Tc5 transposase DNA-binding domainDomainInterproscan
PF09607
all species →		BrkDBDBrinker DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010921
all species →		Homologous_superfamilyTrp repressor/replication initiatorInterproscan
IPR006600
all species →		DomainHTH CenpB-type DNA-binding domainInterproscan
IPR009057
all species →		Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR018586
all species →		DomainBrinker DNA-binding domainInterproscan

 PANTHER
No PANTHER signature was detected for amic_s0038.g27.t2. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0043565
all species →		Molecular Functionsequence-specific DNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0038.g27.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP