Detailed information of amic_s0040.g104.t1 in Acropora microphthalma

Genomic Location: sc0000040_pilon:1527377...1583903
NR annotation: B8VIW9.1, RecName: Full=Fibronectin type III domain-containing protein; AltName: Full=Neuroglian-like protein; Flags: Precursor [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B8VIW9Fibronectin type III domain-containing protein OS=Acropora millepora OX=45264 PE=1 SV=1
Q05B18Protein SHQ1 homolog OS=Xenopus tropicalis OX=8364 GN=shq1 PE=2 SV=1
Q7TMX5Protein SHQ1 homolog OS=Mus musculus OX=10090 GN=Shq1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000412 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13927
all species →		Ig_3Immunoglobulin domainDomainInterproscan
PF21413
all species →		SHQ1-like_CSSHQ1-like, CS domainDomainInterproscan
PF00041
all species →		fn3Fibronectin type III domainDomainInterproscan
PF04925
all species →		SHQ1SHQ1 protein, Shq1 domainDomainInterproscan
PF13843
all species →		DDE_Tnp_1_7Transposase IS4DomainInterproscan
PF00047
all species →		igImmunoglobulin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR003961
all species →		DomainFibronectin type IIIInterproscan
IPR036179
all species →		Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR003599
all species →		DomainImmunoglobulin subtypeInterproscan
IPR003598
all species →		DomainImmunoglobulin subtype 2Interproscan
IPR007110
all species →		DomainImmunoglobulin-like domainInterproscan
IPR048696
all species →		DomainSHQ1-like, CS domainInterproscan
IPR036116
all species →		Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR039742
all species →		FamilyProtein Shq1Interproscan
IPR007009
all species →		DomainShq1, C-terminal domainInterproscan
IPR029526
all species →		DomainPiggyBac transposable element-derived proteinInterproscan
IPR013151
all species →		DomainImmunoglobulinInterproscan
IPR008978
all species →		Homologous_superfamilyHSP20-like chaperoneInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12967
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0000493
all species →		Biological Processbox H/ACA snoRNP assemblyInterproscan
GO:0005654
all species →		Cellular ComponentnucleoplasmInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0051082
all species →		Molecular Functionunfolded protein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0040.g104.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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