Detailed information of amic_s0040.g180.t1 in Acropora microphthalma

Genomic Location: sc0000040_pilon:2657770...2660395
NR annotation: XP_044183052.1, LOW QUALITY PROTEIN: ETS domain-containing protein Elk-1-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A4GTP4ETS domain-containing protein Elk-1 OS=Rattus norvegicus OX=10116 GN=Elk1 PE=1 SV=1
P19419ETS domain-containing protein Elk-1 OS=Homo sapiens OX=9606 GN=ELK1 PE=1 SV=2
P41969ETS domain-containing protein Elk-1 OS=Mus musculus OX=10090 GN=Elk1 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000173 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00178
all species →		EtsEts-domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000418
all species →		DomainEts domainInterproscan
IPR036388
all species →		Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR036390
all species →		Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR046328
all species →		FamilyETS familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11849
all species →		ETSInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003700
all species →		Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0043565
all species →		Molecular Functionsequence-specific DNA bindingInterproscan
GO:0000981
all species →		Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0030154
all species →		Biological Processcell differentiationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0040.g180.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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