Detailed information of amic_s0041.g74.t2 in Acropora microphthalma

Genomic Location: sc0000041_pilon:1339918...1351706
NR annotation: CAH3120340.1, unnamed protein product [Porites lobata]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q12872Splicing factor, suppressor of white-apricot homolog OS=Homo sapiens OX=9606 GN=SFSWAP PE=1 SV=3
D3ZTQ1Splicing factor, suppressor of white-apricot homolog OS=Rattus norvegicus OX=10116 GN=Sfswap PE=1 SV=1
Q3USH5Splicing factor, suppressor of white-apricot homolog OS=Mus musculus OX=10090 GN=Sfswap PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003280 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01805
all species →		SurpSurp moduleFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040397
all species →		FamilySuppressor of white apricotInterproscan
IPR035967
all species →		Homologous_superfamilySWAP/Surp superfamilyInterproscan
IPR000061
all species →		DomainSWAP/SurpInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13161
all species →		SPLICING FACTOR SUPPRESSOR OF WHITE APRICOTInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000395
all species →		Biological ProcessmRNA 5'-splice site recognitionInterproscan
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0006396
all species →		Biological ProcessRNA processingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0041.g74.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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