Detailed information of amic_s0042.g20.t1 in Acropora microphthalma

Genomic Location: sc0000042_pilon:297266...320425
NR annotation: XP_029203998.2, tetratricopeptide repeat protein 13-like isoform X2 [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8NBP0Tetratricopeptide repeat protein 13 OS=Homo sapiens OX=9606 GN=TTC13 PE=1 SV=3
F4JS25Suppressor of RPS4-RLD 1 OS=Arabidopsis thaliana OX=3702 GN=SRFR1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005320 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13432
all species →		TPR_16Tetratricopeptide repeatRepeatInterproscan
PF07719
all species →		TPR_2Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR019734
all species →		RepeatTetratricopeptide repeatInterproscan
IPR013105
all species →		RepeatTetratricopeptide repeat 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44523
all species →		TETRATRICOPEPTIDE REPEAT PROTEIN 13Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0042.g20.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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