Gene detail

Detailed information of amic_s0042.g62.t1 in Acropora microphthalma

Genomic Location: sc0000042_pilon:884435...898782
NR annotation: XP_015762795.1, PREDICTED: RAC-alpha serine/threonine-protein kinase-like [Acropora digitifera]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

amic_s0042.g62.t1

GGGTACTTACAGTTGGGAGTTCGCGACGGCTTCTTGAAGCTACGCTGGTAGCTGTCTTGTTTGTTAATAAAACTTTCGAGGAATAGCAAGCAGGTTCTTCACAGCAGGTGTAGTGATGTCATCTGTTAACGGTCCAACCCCTGGAGCAACAATTGTGAAAGTGGGCTGGCTCCAGAAGAGAGGGGAATATATCAAGACATGGAGAGCAAGGTACTTTCAGCTTTGGAGTGATGGCAGTTTCATTGGTTATAAGGAAGTACCCAAATCCAGAGAAACAGAACCTCTCAACAACTTCTCTGTTTCCAAATGTCAGATAATGAAAACTGAAAAACCAAAGTCAAATTCATTTATAATAAGATGTTGGCAGTGGACGACATTAATAGAGAGGACATTTCATTTAGATGACACAGCTGAAAGGGAGGAGTGGATAACGGCCATCCAGGAAGTTGCTGATCAGCTACGTAAAAGCGAAAAAAAAACTGAAAATGGTGATTCAGATGAAATTACCATATCAAGTCATAAAATGACTCTGGATGACTTTCATTTACTCAGAGTTCTTGGTAAAGGAACATTTGGCAAGGTCATGTTGGCAAAGAACAAAAAGACTGAGGAGGTTGTAGCATTGAAGATTCTTAAGAAAGAAGTCATTCTCGCTAAGGAAGAAGTTGAGCACACATTAACAGAAAACAGAGTGTTGAAAATGATGGTGCATCCTTTTCTTACAGCATTGCGCTGCTCCTTTCAAACAAAAGAAAGATTAATTTTTGTAATGGAATACGTCAATGGTGGTGAGCTGTTTTTTCACCTGTCCAAAGAGCGTGTGTTCTCTGAAGAGCGATCCAGGTTTTATGCTTCTGAGATTGTGCTGGCTGTCAAGTATCTTCATGAGAAGAAAGTGGTTTACAGAGATCTCAAGCTGGAAAATCTCTTGCTTGACTCAGAGGGTCATATTAAAATTGCTGACTTTGGTCTTTGCAAAGAAGACATCACATATGGAGCAACAACAAAGACTTTCTGTGGTACACCTGAATACTTGGCACCAGAGGTCCTCGAAGATAATGACTATGGCCCTGCAGTTGATTGGTGGGGAGTGGGTGTGGTCATGTACGAGATGATGTGTGGTCGCTTGCCTTTCTATAACAGGGATCACGAGACTCTCTTTGAACTCATTTTGACAGAAGATGTGAAATTTCCTACCAGAATTACTGAAAAAGCCAAGAATGTATTATCTGCACTTTTACAAAAGAACCCATCGACCCGGCTTGGTGGTGGCCCTGAGGATGCAAAAGAAGTCATGAATCATCCATTCTTTCTCACAGTAAACTGGGATGATGTCTACCACAAAAGGATAAAACCACCTTTCAAGCCAGTGGTAAAATCAGACACAGATGTTTCAAACTTTGATGAAGACTTCACCAATGAACCAGTTGATTTATCACCAGCAGATGGTAACCTTCCCGAGATTGCAGAAGAAGATGAAGCAAGTTTTCAACAGTTTTCGTGAAAAGAAACAAAACCATAATTGCTTTAAGATGGATTCTCTTGAGTAGCTTCCTTGCCATGTACAAAAATATCATGTGAAAGCCCCTGGCAGAAGTACAGGGTAAAGGTGAAGATGGCATGTAGCTGTTGCAAATTCTGACAAGGATATTCATGTTTCAAGATTGGGATGTACTTTCTATTTTAAAAAAAGGGCCAAAATTTTTGCAGGGTTGTGCAAATGATACAGTAACCTAGGTAGCTAGATTTGGATCATTAATAATTATTCTACTTTCTCATGCTATATTTAATAACATGTCAGTCACAGCCAAGCAATGTCATTTAATGTGGAGCCttattattattattatttttcttaataCTTGTGTGATAAGTTGAAAGTGTTTCTTTCATGGCTGTCATTTTTGTGCTAAGTTAGGCTTTTTTTTTTGTCCTAAACATTTAGAGAAAAGGGTATGAAGCACAGTAAATAGAGTGTGGCTGTGATTATATTTTTTCTTGATCAGCACTTTTGAGGTAATTCAGTACAGTTTTAGAGAAATAATTGAAAATAATTTTGTAAAATTAAGAGAGCTTAGGCTTAATATTAATAATAATTATCATTATTCTTCTACTAAAAAATGAAAAAGAAACCACTGTGGATTTTCTGTTTGTATAAAAAATGGCAATTTTTTTTTCTTACTAAATTAGTGCACTGTTTTTGTCAGTTTGCCATTATTTTAAGCAAAAAATAAAATAGATTGAACTATGATTGAATGATTTTTTCAAACATTTTGTTTTGTTAAGCAGAGGTAATTAATTGGAGATTGAACTGTGCTTGACAAAAAACTTTATGCATTTGATCCTGTGTTTTGTTCAGTGGTATCAAAAAAAAAGTTTCAGCTTTTGAAATTTAAAGCAACAATAATTTCATTTTTATTCTTGTGTCTGTAAATATTGTAAGACATTTTTGGTTTACTATAGGGTAAGAAAGCAACATGATCTTTCTTTTATTTTTTTTAATCTGAATAAACCAACATATTTTCT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q99014	Protein kinase C-like OS=Hypocrea jecorina OX=51453 GN=pkc1 PE=3 SV=1
P87253	Protein kinase C-like OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=NCU06544 PE=3 SV=2
Q8INB9	RAC serine/threonine-protein kinase OS=Drosophila melanogaster OX=7227 GN=Akt PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000508 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00433 all species →	Pkinase_C	Protein kinase C terminal domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000961 all species →	Domain	AGC-kinase, C-terminal	Interproscan
IPR017892 all species →	Domain	Protein kinase, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24351 all species →	RIBOSOMAL PROTEIN S6 KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0042.g62.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.