Detailed information of amic_s0042.g91.t1 in Acropora microphthalma

Genomic Location: sc0000042_pilon:1234587...1239723
NR annotation: XP_015762844.1, PREDICTED: outer dense fiber protein 3-like [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5M8M2Ciliary microtubule associated protein 1B OS=Mus musculus OX=10090 GN=Cimap1b PE=2 SV=1
Q920N1Ciliary microtubule associated protein 1A OS=Mus musculus OX=10090 GN=Cimap1a PE=1 SV=2
Q2TBH0Ciliary microtubule associated protein 1A OS=Bos taurus OX=9913 GN=CIMAP1A PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001462 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07004
all species →		SHIPPO-rptSperm-tail PG-rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010736
all species →		RepeatSperm-tail PG-rich repeatInterproscan
IPR051291
all species →		FamilyCiliary Microtubule AssociatedInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21580
all species →		SHIPPO-1-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005856
all species →		Cellular ComponentcytoskeletonInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0042.g91.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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