Gene detail

Detailed information of amic_s0044.g16.t1 in Acropora microphthalma

Genomic Location: sc0000044_pilon:245396...282440
NR annotation: XP_029188828.2, uncharacterized protein LOC114956004 [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

amic_s0044.g16.t1

ATGGCTGTCTTTGAACCAAGCGGGGCACACGTGCTTCACTCGATGAAACCGTGCGATTTGTCATGTTGCACCAAAAGCGAGATCAAGAAATACTTTCAAAATACTTATGATCTATACGAGACTCTGTTTAAAGCACTCAAAGATGAGTCATCATTTTATAAGTGCCCTGATCGTCTCCGTCTACCTCTCATATTTTACTTTGGCCACACTGCTGCTGTTTATGTCAACAAACTATTGCTTGCAGGACTGTTAAAGGAGAGGATAAATTTTGCCTTTGAGACCCTGTTTGAGACTGGTGTTGATGAGATGTCATGGGATGATGTGGAAAACTATCGAATGGGAGGTAGTTTTGTGTGGCCAAAGGTCTGGGAAGTAGCACAATATCGTCAGAAAGTACGTCAAGCTGTTTTGGATGTAATTGAGGACACACAACTGGAACTGCCAATAACACAGGAAAGCAGATGGTGGGCTGTTTTCATGGGACTTGAACATGAGAGAGTCCACTTTGAGACATCATCTGTTCTGATTCGTCAGATGCCATTAGAACTCGTCAGAAAGCCTGAAGGATGGAAATATGGACCAGTGACAACAGGCGTTCCTGTGTTGTCAAATCCCATGATTGAAACAGAGGAACAGTCTGTAAGCTTGGGAAAGCCTGGAAACTTTCCATCGTATGGCTGGGACAATGAGTATGGTCAGTGGAATGTCAAGGTGCCACCATTCAAAGCATCCAAGTATTTGGTGACTAACCAGGAATTCTTGGAGTTTGTTAGAGATGGTGGATATGAGAATTCTAAGTACTGGACGAAAGAAGGCTGGAAGTGGAAACAATTTCGCAAACAACAGCATCCCACTTTCTGGGTTTGTCAAAACAAGTGTCAATCAGGGTGCGGTTCCGACTTGTCGACCTACTCACACTGCAACCCACGAGAGATACAAGTCAATCAAAAGGGCATGAGGGACAGTTGGATTTGGAACGGAGATCAAAATGGTGTTGTCAACGTCTACTACAATGGAAACGGTTTTTTAGATCGCCCTGCTGGCATTGACAGAGATGTAGACATTGATTTGCATAATGGTGGCTGCATAAAGAAATGCTGTCCTTACAAATTACGTCTTATGTTTGATGTGGTTGATTTACCAATGGACTGGCCAGTGGAGGTGAATTATCACGAAGCCAAGGCTTTTTGCTCATGGAGGGGCCCAGACTTCCGCCTGCCGACAGAGGCCGAGCACCATGTTATGCGAGGACCTCAGGTCTCTCCTACCATCAGTACCAAATGCGATATCATTTTCCAAGACAAAGTAAATGCCAACATGAACATGACCTATGGTTCCTCTACTCCTGTCAACATGTATACACCCTCAAAAGCTGGCTTCTGTGATGTTTTTGGGAATGTGTGGGAATGGGTCGAAGACCACTTTAATGGATTTGAAGACTTCAAAAGTCATCATCTATACGCGGATTTTTCAACACCGACCTTCGATGGAAGGCATAACATAATAATGGGTGGCAGCTGGGTGTCTACTGGAGATGAAGCATCGCGTTTTGCCCGCTATGCCTTCCGTCGCCATTTCTTTCAGCATCTCGGTTTTAGAGTGGTTAAGTCAGTTGGGTATAGTGTTCCTGTGCACTTGGTTGGTACACCTGTGTTTGTACTAGGCGTTGGTGTGGAAGACAATAAGGTCACACTACCTGGCACTGTTGAAAGCAAGGCTTATATCAGCACAACAAACTCACAGTATTTAGATGATGACATGGAGTTTTTGCACCAAGAAGTGTTGTCCAGCTTTGGAGATCTCATGGGAGTTGAAAGTGATGCTGAAAGCTATAAACATCTTTTAATTGCTTGCAAAGAAGCTATACGGAAGTTTGAATGCCCAGTGGAGAAGGCTTTGGACATAATGTGCTCAGTTGGTCGGTTTTCGTATGAACTCAGCAAGCATTTTGACGAGATCTCTGTTGACCTGGCTACCGTTGGCAGCACTGCCTGGGAAGTTGCGGGACGCACCTTCACTGTGTCAGTGAGAGACTCTGTGGATGATTACACTCAGCTTATGAAGGAGATTTTTGACTTTGATCTGCTGAAGAGGCTGATTTCTGGAGAAAATGGTCAGCCACCTTTCACATTTGTTGCAAATGCTATGCATGGAGTCTGGCAAATAAATCACGGTCTGTTTCCTTTAGTCATTCATACATCCATGGCTGTCTTTGAACCAAGCGGGGCACACATGCTTCACTCTGTGAAACCGTGTGATTTGTCATCTTGCACCAAAAGCGAGATCAAGAAATACTTTGAAAATTCTTATGATCTATACGAGACTCTGTTTAAAGCACTCAAAGATGAGTCATCATTTTATAAGTGCCCTGATCGTCTCCGTCTACCTCTCATATTTTACTTTGGCCACACTGCTGCTGTTTATGTCAACAAACTTATGCTCGCCGGACTGTTAAAGGAGAGGATAAATTTTGCCTTTGAGACCCTGTTTGAGACTGGTGTTGATGAGATGTCATGGGATGATGTGGAAAACTATCGAATGGGAGGTAGTTTTGTGTGGCCAAAGGTCTGGGAAGTAGCACAATATCGTCAGAAAGTACGTCAAGCTGTTTTGGATGTAATTGAGGACACACAACTGGAACTGCCAATAACACAGGAAAGCAGATGGTGGGCTGTTTTCATGGGACTTGAACATGAGAGAGTCCACTTTGAGACATCATCTGTTCTGATTCGTCAGATGCCATTAGAACTCGTCAGAAAGCCTGAAGGATGGAAATATGGACCAGTGACAACAGGTGTTTCTGTGTTGTCAAATCCCATGATTGAAACAGAGGAACAGTCTGTAAGCTTGGGAAAGCCAGGAAACTTTCCATCGTATGGCTGGGACAATGAGTATGGTCAGTGGAATGTCAAGGTACCACCATTCAAAGCATCCAAGTATTTGGTGACTAACCAGGAATTCTTGGAGTTTGTTAAAGATGGTGGATATGAGAATTCTAAGTACTGGACGAAAGAAGACAACACCGTCACACTACCTGGCACTGTTGAAAGCAAAGCTTATATGAGCGCCACAAACTCACAATATTTAGACGATACCATGGAGTTTTTGCACCAAGAAGTGCTGTCCAGCTTTGGAGATCTTATGGGAGTTGAAAGTGATGCTGAAAGCTATAAACATCTTGTAATTGCTTGTAAAGAGGCTATACAGAAGTTTGAATGCCCAGTAAAGAAGGCTTTGGACATAATGTGCTCAGTTGGTCGGTTTTCGTATGAACTCAGCAAGCATTTTGACGAGGTTAGTGCTATAGACCACAGTGGTCGCTTGTTAGACGCTGCTATCAAGATTCAAGAAGGAAAAGTTCTAAATATTAAGGGTGCTGGAGAGCTGTCGAAGCTCAACATTTCATTAGACGAAATCAAGGCTAACATTGATCGAGTAAGGTTTCACCAGCTCACCTGGTTGCCAAATGAGATTGGTATATTTGACTTCATTATTCTGTCGCAGCTTCATCGCCTGTCCAACCCGAAAGCCTGGCTGATTCGCTTGTGGGAGATCATTGACCCAAAGGGACTGCTGTTGATCAAAACCAATTCTCAGTGGGATATAGAAGCTCTCAAGGCAATACTAGGGAGCAAATTTAAACTGTTGGAGTCACATGTTGCTTCAGAAACAAGGGAGGGGCTGAGTAAATGTGTCAGGAGTCGCTCAAGCATCAGCATATGGCGTTTGAAGCATTGA

Transcript

amic_s0044.g16.t1

GACCCAAGAAGCGATCAAAAGCCCACAGTTTCTATTTTCCGTCTAAGTGTACTCCTTTTCGTTCAATGGACGACAAATTTAGCCTCCAAATAAGGAAAAGCTAATAACTGTACTTGCTCTTCAACTCAGCACAGAACATTCGGGCATCCATGGCTGTCTTTGAACCAAGCGGGGCACACGTGCTTCACTCGATGAAACCGTGCGATTTGTCATGTTGCACCAAAAGCGAGATCAAGAAATACTTTCAAAATACTTATGATCTATACGAGACTCTGTTTAAAGCACTCAAAGATGAGTCATCATTTTATAAGTGCCCTGATCGTCTCCGTCTACCTCTCATATTTTACTTTGGCCACACTGCTGCTGTTTATGTCAACAAACTATTGCTTGCAGGACTGTTAAAGGAGAGGATAAATTTTGCCTTTGAGACCCTGTTTGAGACTGGTGTTGATGAGATGTCATGGGATGATGTGGAAAACTATCGAATGGGAGGTAGTTTTGTGTGGCCAAAGGTCTGGGAAGTAGCACAATATCGTCAGAAAGTACGTCAAGCTGTTTTGGATGTAATTGAGGACACACAACTGGAACTGCCAATAACACAGGAAAGCAGATGGTGGGCTGTTTTCATGGGACTTGAACATGAGAGAGTCCACTTTGAGACATCATCTGTTCTGATTCGTCAGATGCCATTAGAACTCGTCAGAAAGCCTGAAGGATGGAAATATGGACCAGTGACAACAGGCGTTCCTGTGTTGTCAAATCCCATGATTGAAACAGAGGAACAGTCTGTAAGCTTGGGAAAGCCTGGAAACTTTCCATCGTATGGCTGGGACAATGAGTATGGTCAGTGGAATGTCAAGGTGCCACCATTCAAAGCATCCAAGTATTTGGTGACTAACCAGGAATTCTTGGAGTTTGTTAGAGATGGTGGATATGAGAATTCTAAGTACTGGACGAAAGAAGGCTGGAAGTGGAAACAATTTCGCAAACAACAGCATCCCACTTTCTGGGTTTGTCAAAACAAGTGTCAATCAGGGTGCGGTTCCGACTTGTCGACCTACTCACACTGCAACCCACGAGAGATACAAGTCAATCAAAAGGGCATGAGGGACAGTTGGATTTGGAACGGAGATCAAAATGGTGTTGTCAACGTCTACTACAATGGAAACGGTTTTTTAGATCGCCCTGCTGGCATTGACAGAGATGTAGACATTGATTTGCATAATGGTGGCTGCATAAAGAAATGCTGTCCTTACAAATTACGTCTTATGTTTGATGTGGTTGATTTACCAATGGACTGGCCAGTGGAGGTGAATTATCACGAAGCCAAGGCTTTTTGCTCATGGAGGGGCCCAGACTTCCGCCTGCCGACAGAGGCCGAGCACCATGTTATGCGAGGACCTCAGGTCTCTCCTACCATCAGTACCAAATGCGATATCATTTTCCAAGACAAAGTAAATGCCAACATGAACATGACCTATGGTTCCTCTACTCCTGTCAACATGTATACACCCTCAAAAGCTGGCTTCTGTGATGTTTTTGGGAATGTGTGGGAATGGGTCGAAGACCACTTTAATGGATTTGAAGACTTCAAAAGTCATCATCTATACGCGGATTTTTCAACACCGACCTTCGATGGAAGGCATAACATAATAATGGGTGGCAGCTGGGTGTCTACTGGAGATGAAGCATCGCGTTTTGCCCGCTATGCCTTCCGTCGCCATTTCTTTCAGCATCTCGGTTTTAGAGTGGTTAAGTCAGTTGGGTATAGTGTTCCTGTGCACTTGGTTGGTACACCTGTGTTTGTACTAGGCGTTGGTGTGGAAGACAATAAGGTCACACTACCTGGCACTGTTGAAAGCAAGGCTTATATCAGCACAACAAACTCACAGTATTTAGATGATGACATGGAGTTTTTGCACCAAGAAGTGTTGTCCAGCTTTGGAGATCTCATGGGAGTTGAAAGTGATGCTGAAAGCTATAAACATCTTTTAATTGCTTGCAAAGAAGCTATACGGAAGTTTGAATGCCCAGTGGAGAAGGCTTTGGACATAATGTGCTCAGTTGGTCGGTTTTCGTATGAACTCAGCAAGCATTTTGACGAGATCTCTGTTGACCTGGCTACCGTTGGCAGCACTGCCTGGGAAGTTGCGGGACGCACCTTCACTGTGTCAGTGAGAGACTCTGTGGATGATTACACTCAGCTTATGAAGGAGATTTTTGACTTTGATCTGCTGAAGAGGCTGATTTCTGGAGAAAATGGTCAGCCACCTTTCACATTTGTTGCAAATGCTATGCATGGAGTCTGGCAAATAAATCACGGTCTGTTTCCTTTAGTCATTCATACATCCATGGCTGTCTTTGAACCAAGCGGGGCACACATGCTTCACTCTGTGAAACCGTGTGATTTGTCATCTTGCACCAAAAGCGAGATCAAGAAATACTTTGAAAATTCTTATGATCTATACGAGACTCTGTTTAAAGCACTCAAAGATGAGTCATCATTTTATAAGTGCCCTGATCGTCTCCGTCTACCTCTCATATTTTACTTTGGCCACACTGCTGCTGTTTATGTCAACAAACTTATGCTCGCCGGACTGTTAAAGGAGAGGATAAATTTTGCCTTTGAGACCCTGTTTGAGACTGGTGTTGATGAGATGTCATGGGATGATGTGGAAAACTATCGAATGGGAGGTAGTTTTGTGTGGCCAAAGGTCTGGGAAGTAGCACAATATCGTCAGAAAGTACGTCAAGCTGTTTTGGATGTAATTGAGGACACACAACTGGAACTGCCAATAACACAGGAAAGCAGATGGTGGGCTGTTTTCATGGGACTTGAACATGAGAGAGTCCACTTTGAGACATCATCTGTTCTGATTCGTCAGATGCCATTAGAACTCGTCAGAAAGCCTGAAGGATGGAAATATGGACCAGTGACAACAGGTGTTTCTGTGTTGTCAAATCCCATGATTGAAACAGAGGAACAGTCTGTAAGCTTGGGAAAGCCAGGAAACTTTCCATCGTATGGCTGGGACAATGAGTATGGTCAGTGGAATGTCAAGGTACCACCATTCAAAGCATCCAAGTATTTGGTGACTAACCAGGAATTCTTGGAGTTTGTTAAAGATGGTGGATATGAGAATTCTAAGTACTGGACGAAAGAAGACAACACCGTCACACTACCTGGCACTGTTGAAAGCAAAGCTTATATGAGCGCCACAAACTCACAATATTTAGACGATACCATGGAGTTTTTGCACCAAGAAGTGCTGTCCAGCTTTGGAGATCTTATGGGAGTTGAAAGTGATGCTGAAAGCTATAAACATCTTGTAATTGCTTGTAAAGAGGCTATACAGAAGTTTGAATGCCCAGTAAAGAAGGCTTTGGACATAATGTGCTCAGTTGGTCGGTTTTCGTATGAACTCAGCAAGCATTTTGACGAGGTTAGTGCTATAGACCACAGTGGTCGCTTGTTAGACGCTGCTATCAAGATTCAAGAAGGAAAAGTTCTAAATATTAAGGGTGCTGGAGAGCTGTCGAAGCTCAACATTTCATTAGACGAAATCAAGGCTAACATTGATCGAGTAAGGTTTCACCAGCTCACCTGGTTGCCAAATGAGATTGGTATATTTGACTTCATTATTCTGTCGCAGCTTCATCGCCTGTCCAACCCGAAAGCCTGGCTGATTCGCTTGTGGGAGATCATTGACCCAAAGGGACTGCTGTTGATCAAAACCAATTCTCAGTGGGATATAGAAGCTCTCAAGGCAATACTAGGGAGCAAATTTAAACTGTTGGAGTCACATGTTGCTTCAGAAACAAGGGAGGGGCTGAGTAAATGTGTCAGGAGTCGCTCAAGCATCAGCATATGGCGTTTGAAGCATTGATGTGGTTTCAGTGCTGAGAGTAATAGACTTTTCAAAACTGAAGCAATCCTTTATAATCAAGGTTACATGATAAAGGCCATGTCCTCATGATGGTTTCGTTTCTTCTGCGCAACTTAAATATTCTGGAGTATTGCACAAATAACCTTAGGCATTTTTTGGAATTTCTCGGATTTGTCCCTCTTTCTTGCAAATTGTCCCTCTTTCTTGCAAATGTTAGGAAGAAAAGAAAAAGAGTCCTGTTTGGAACAATAAAGTAGTAAACGAAATATAATTTTTTTTCCGATTAAAGCAAATAAATAAAAAAAATCAGGTTCAGACGGAAGATATAAGTTCATTGCTTTCATAGTTTGAAAATTATAAAACATGGAATAAGATGCTATAAAATGGCATGACTCGGAAAAGTTGGAATTTACAAGTCGCAAGACCGGCAACCAGTTTGATATTTCATTCATTTCACTCCGTTGTTTAAGCCTTAAAGTTCCTATTTTTCTAATTCCAGTTTTCCACTTTCTTCATGAAATGGAAGAATATTCTGCATATAATGGTTGTAAAACGGTTTCCTAATAACGTACTCAAGGGAGGCGACAAGCGTATTTTCACATCATTTCTTCAGTAATTAATCCGTGAATTGAATGTTGCTAATTATATTTTGCTACTTATGTTTCACGCAATAAACTATGGAGTCTCAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O94632	Ergothioneine biosynthesis protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=egt1 PE=1 SV=4
Q9SGC1	Probable phosphoglucomutase, cytoplasmic 2 OS=Arabidopsis thaliana OX=3702 GN=At1g70730 PE=1 SV=1
O49299	Probable phosphoglucomutase, cytoplasmic 1 OS=Arabidopsis thaliana OX=3702 GN=At1g23190 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002544 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12867 all species →	DinB_2	DinB superfamily	Domain	Interproscan
PF03781 all species →	FGE-sulfatase	Sulfatase-modifying factor enzyme 1	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR042095 all species →	Homologous_superfamily	Sulfatase-modifying factor enzyme superfamily	Interproscan
IPR027577 all species →	Family	5-histidylcysteine sulfoxide synthase	Interproscan
IPR051043 all species →	Family	Sulfatase Modifying Factor and Kinase	Interproscan
IPR029063 all species →	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR016187 all species →	Homologous_superfamily	C-type lectin fold	Interproscan
IPR024775 all species →	Domain	DinB-like domain	Interproscan
IPR005532 all species →	Domain	Sulfatase-modifying factor enzyme	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23150 all species →	SULFATASE MODIFYING FACTOR 1, 2	Interproscan

Gene Ontology

No Gene Ontology signature was detected for amic_s0044.g16.t1. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0044.g16.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.