Detailed information of amic_s0045.g107.t1 in Acropora microphthalma

Genomic Location: sc0000045_pilon:1404528...1414633
NR annotation: XP_015752329.1, PREDICTED: CD209 antigen-like isoform X2 [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P49300C-type lectin domain family 10 member A OS=Mus musculus OX=10090 GN=Clec10a PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000566 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00059
all species →		Lectin_CLectin C-type domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050828
all species →		FamilyC-type lectin and matrix domain-containing proteinInterproscan
IPR001304
all species →		DomainC-type lectin-likeInterproscan
IPR016187
all species →		Homologous_superfamilyC-type lectin foldInterproscan
IPR016186
all species →		Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45710
all species →		C-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 180Interproscan

 Gene Ontology
No Gene Ontology signature was detected for amic_s0045.g107.t1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0045.g107.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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