Detailed information of amic_s0045.g36.t1 in Acropora microphthalma

Genomic Location: sc0000045_pilon:438777...447595
NR annotation: XP_015754178.1, PREDICTED: elongator complex protein 5-like, partial [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A1A5V9Elongator complex protein 5 OS=Danio rerio OX=7955 GN=elp5 PE=2 SV=1
Q24050Elongator complex protein 5 OS=Drosophila melanogaster OX=7227 GN=Elp5 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005358 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10483
all species →		Elong_Iki1Elongator subunit Iki1FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019519
all species →		FamilyElongator complex protein 5Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15641
all species →		ELONGATOR COMPLEX PROTEIN 5Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000049
all species →		Molecular FunctiontRNA bindingInterproscan
GO:0002098
all species →		Biological ProcesstRNA wobble uridine modificationInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0006400
all species →		Biological ProcesstRNA modificationInterproscan
GO:0033588
all species →		Cellular Componentelongator holoenzyme complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K11376ELP5, IKI1; elongator complex protein 5-Transfer RNA biogenesisko03016deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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