Detailed information of amic_s0045.g67.t2 in Acropora microphthalma

Genomic Location: sc0000045_pilon:769499...790108
NR annotation: XP_015748162.1, PREDICTED: uncharacterized protein LOC107327949 [Acropora digitifera]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003955 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14761
all species →		HPS3_NHermansky-Pudlak syndrome 3 protein, N-terminalRepeatInterproscan
PF14763
all species →		HPS3_CHermansky-Pudlak syndrome 3 protein, C-terminal regionRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017216
all species →		FamilyHermansky-Pudlak syndrome 3 proteinInterproscan
IPR029437
all species →		DomainBLOC-2 complex member HPS3, N-terminal domainInterproscan
IPR029438
all species →		DomainBLOC-2 complex member HPS3, C-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR28633
all species →		HERMANSKY-PUDLAK SYNDROME 3 PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0006996
all species →		Biological Processorganelle organizationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K20190HPS3; Hermansky-Pudlak syndrome 3 protein-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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