Gene detail

Detailed information of amic_s0046.g36.t2 in Acropora microphthalma

Genomic Location: sc0000046_pilon:482541...491778
NR annotation: XP_015770001.1, PREDICTED: calmodulin-like isoform X2 [Acropora digitifera]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P04464	Calmodulin OS=Triticum aestivum OX=4565 PE=1 SV=3
Q40302	Calmodulin OS=Macrocystis pyrifera OX=35122 PE=2 SV=3
Q71UH5	Calmodulin OS=Globisporangium splendens OX=82926 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000122 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13499 all species →	EF-hand_7	EF-hand domain pair	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018247 all species →	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR002048 all species →	Domain	EF-hand domain	Interproscan
IPR050230 all species →	Family	Calcium-Regulated Muscle Contraction and Cellular Process	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23048 all species →	MYOSIN LIGHT CHAIN 1, 3	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0016460 all species →	Cellular Component	myosin II complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0046.g36.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.