Detailed information of amic_s0046.g41.t2 in Acropora microphthalma

Genomic Location: sc0000046_pilon:555363...589050
NR annotation: XP_029210262.2, sodium/hydrogen exchanger 10-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A3RL54Sperm-specific sodium:proton exchanger OS=Strongylocentrotus purpuratus OX=7668 GN=SLC9C1 PE=1 SV=1
Q9LKW9Sodium/hydrogen exchanger 7 OS=Arabidopsis thaliana OX=3702 GN=NHX7 PE=1 SV=1
Q3YL57Sodium/hydrogen exchanger 8 OS=Arabidopsis thaliana OX=3702 GN=NHX8 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004272 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05380
all species →		Peptidase_A17Pao retrotransposon peptidase FamilyInterproscan
PF00520
all species →		Ion_transIon transport proteinFamilyInterproscan
PF00027
all species →		cNMP_bindingCyclic nucleotide-binding domainDomainInterproscan
PF00999
all species →		Na_H_ExchangerSodium/hydrogen exchanger familyFamilyInterproscan
PF03564
all species →		DUF1759Protein of unknown function (DUF1759)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008042
all species →		FamilyRetrotransposon, PaoInterproscan
IPR000595
all species →		DomainCyclic nucleotide-binding domainInterproscan
IPR005821
all species →		DomainIon transport domainInterproscan
IPR027359
all species →		Homologous_superfamilyVoltage-dependent channel domain superfamilyInterproscan
IPR018490
all species →		Homologous_superfamilyCyclic nucleotide-binding domain superfamilyInterproscan
IPR006153
all species →		DomainCation/H+ exchangerInterproscan
IPR005312
all species →		FamilyProtein of unknown function DUF1759Interproscan
IPR014710
all species →		Homologous_superfamilyRmlC-like jelly roll foldInterproscan
IPR043502
all species →		Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22955
all species →		RETROTRANSPOSONInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005216
all species →		Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811
all species →		Biological Processmonoatomic ion transportInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0055085
all species →		Biological Processtransmembrane transportInterproscan
GO:0006812
all species →		Biological Processmonoatomic cation transportInterproscan
GO:0015297
all species →		Molecular Functionantiporter activityInterproscan
GO:1902600
all species →		Biological Processproton transmembrane transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0046.g41.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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