Detailed information of amic_s0047.g11.t2 in Acropora microphthalma

Genomic Location: sc0000047_pilon:135836...159397
NR annotation: XP_029192649.2, GTPase-activating Rap/Ran-GAP domain-like protein 3 isoform X1 [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5VVW2GTPase-activating Rap/Ran-GAP domain-like protein 3 OS=Homo sapiens OX=9606 GN=GARNL3 PE=1 SV=2
Q5ZJY3GTPase-activating Rap/Ran-GAP domain-like protein 3 OS=Gallus gallus OX=9031 GN=GARNL3 PE=2 SV=1
A5PF44GTPase-activating Rap/Ran-GAP domain-like protein 3 OS=Danio rerio OX=7955 GN=garnl3 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003156 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00780
all species →
CNHCNH domainRepeatInterproscan
PF02145
all species →
Rap_GAPRap/ran-GAPFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000331
all species →
DomainRap/Ran-GAP domainInterproscan
IPR001180
all species →
DomainCitron homology (CNH) domainInterproscan
IPR035974
all species →
Homologous_superfamilyRap/Ran-GAP superfamilyInterproscan
IPR050989
all species →
FamilyRap1/Ran GTPase-activatingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15711
all species →
RAP GTPASE-ACTIVATING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005096
all species →
Molecular FunctionGTPase activator activityInterproscan
GO:0051056
all species →
Biological Processregulation of small GTPase mediated signal transductionInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0090630
all species →
Biological Processactivation of GTPase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0047.g11.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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