Genomic Location: sc0000048_pilon:1184400...1216730
NR annotation: XP_044163899.1, tetratricopeptide repeat protein 37-like [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families
| CDS |
| amic_s0048.g71.t1 |
| Transcript |
| amic_s0048.g71.t1 |
| Protein |
| amic_s0048.g71.t1 |
| UniProt accession | Description |
|---|---|
| Q6DFB8 | Tetratricopeptide repeat protein 37 OS=Xenopus laevis OX=8355 GN=ttc37 PE=2 SV=1 |
| F8VPK0 | Superkiller complex protein 3 OS=Mus musculus OX=10090 GN=Skic3 PE=3 SV=1 |
| Q6PGP7 | Superkiller complex protein 3 OS=Homo sapiens OX=9606 GN=SKIC3 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0002786 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13432 all species → | TPR_16 | Tetratricopeptide repeat | Repeat | Interproscan |
| PF13181 all species → | TPR_8 | Tetratricopeptide repeat | Repeat | Interproscan |
| PF13431 all species → | TPR_17 | Tetratricopeptide repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR019734 all species → | Repeat | Tetratricopeptide repeat | Interproscan |
| IPR011990 all species → | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR039226 all species → | Family | Ski3/TTC37 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR15704 all species → | SUPERKILLER 3 PROTEIN-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0006401 all species → | Biological Process | RNA catabolic process | Interproscan |
| GO:0034427 all species → | Biological Process | obsolete nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' | Interproscan |
| GO:0055087 all species → | Cellular Component | Ski complex | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K12600 | SKI3, TTC37; superkiller protein 3 | - | Messenger RNA biogenesis | ko03019 | deepkoala |