Detailed information of amic_s0049.g33.t1 in Acropora microphthalma

Genomic Location: sc0000049_pilon:374296...384964
NR annotation: XP_029199095.1, L-methionine gamma-lyase-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8RDT4L-methionine gamma-lyase OS=Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / DSM 15643 / BCRC 10681 / CIP 101130 / JCM 8532 / KCTC 2640 / LMG 13131 / VPI 4355) OX=190304 GN=FN1419 PE=1 SV=1
Q8L0X4L-methionine gamma-lyase OS=Fusobacterium nucleatum subsp. polymorphum OX=76857 GN=mgl PE=1 SV=1
Q1M0P5Cystathionine gamma-synthase OS=Helicobacter pylori OX=210 GN=metB PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001289 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01053
all species →		Cys_Met_Meta_PPCys/Met metabolism PLP-dependent enzymeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000277
all species →		FamilyCys/Met metabolism, pyridoxal phosphate-dependent enzymeInterproscan
IPR015422
all species →		Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan
IPR015424
all species →		Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR015421
all species →		Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11808
all species →		TRANS-SULFURATION ENZYME FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0019346
all species →		Biological ProcesstranssulfurationInterproscan
GO:0030170
all species →		Molecular Functionpyridoxal phosphate bindingInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0016846
all species →		Molecular Functioncarbon-sulfur lyase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0049.g33.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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