Detailed information of amic_s0049.g47.t1 in Acropora microphthalma

Genomic Location: sc0000049_pilon:596386...611880
NR annotation: CAH3016948.1, unnamed protein product, partial [Porites evermanni]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P16109P-selectin OS=Homo sapiens OX=9606 GN=SELP PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002384 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00353
all species →
HemolysinCabindRTX calcium-binding nonapeptide repeat (4 copies)RepeatInterproscan
PF00084
all species →
SushiSushi repeat (SCR repeat)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001190
all species →
DomainSRCR domainInterproscan
IPR036772
all species →
Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR011049
all species →
Homologous_superfamilySerralysin-like metalloprotease, C-terminalInterproscan
IPR000436
all species →
DomainSushi/SCR/CCP domainInterproscan
IPR018511
all species →
Conserved_siteHemolysin-type calcium-binding conserved siteInterproscan
IPR035976
all species →
Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR001343
all species →
RepeatRTX calcium-binding nonapeptide repeatInterproscan
IPR050557
all species →
FamilyRTX toxin and mannuronan C5-epimeraseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR38340
all species →
S-LAYER PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0005509
all species →
Molecular Functioncalcium ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0049.g47.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP