Detailed information of amic_s0049.g56.t1 in Acropora microphthalma

Genomic Location: sc0000049_pilon:720222...725660
NR annotation: XP_029196870.2, calretinin-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010830 (this species only)

 Pfam domain
No Pfam domain signature was detected for amic_s0049.g56.t1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR051001
all species →		FamilyCalbindin Calcium-BindingInterproscan
IPR002048
all species →		DomainEF-hand domainInterproscan
IPR018247
all species →		Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR011992
all species →		Homologous_superfamilyEF-hand domain pairInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19972
all species →		CALBINDINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0043005
all species →		Cellular Componentneuron projectionInterproscan
GO:0045202
all species →		Cellular ComponentsynapseInterproscan
GO:0051480
all species →		Biological Processregulation of cytosolic calcium ion concentrationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0049.g56.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP