Detailed information of amic_s0049.g78.t1 in Acropora microphthalma

Genomic Location: sc0000049_pilon:976622...990515
NR annotation: XP_029196868.2, apoptotic chromatin condensation inducer in the nucleus-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004284 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02037
all species →		SAPSAP domainDomainInterproscan
PF16294
all species →		RSB_motifRNSP1-SAP18 binding (RSB) motifMotifInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003034
all species →		DomainSAP domainInterproscan
IPR036361
all species →		Homologous_superfamilySAP domain superfamilyInterproscan
IPR032552
all species →		Conserved_siteAcin1, RNSP1-SAP18 binding (RSB) motifInterproscan
IPR052793
all species →		FamilyExon junction complex-associated proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46589
all species →		APOPTOTIC CHROMATIN CONDENSATION INDUCER IN THE NUCLEUSInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0008380
all species →		Biological ProcessRNA splicingInterproscan
GO:0061574
all species →		Cellular ComponentASAP complexInterproscan
GO:0071011
all species →		Cellular Componentprecatalytic spliceosomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0049.g78.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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