Detailed information of amic_s0050.g88.t1 in Acropora microphthalma

Genomic Location: sc0000050_pilon:841388...845148
NR annotation: XP_029184736.2, tetratricopeptide repeat protein 39B-like isoform X2 [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q95LT8Tetratricopeptide repeat protein 39B OS=Macaca fascicularis OX=9541 GN=TTC39B PE=2 SV=1
Q5VTQ0Tetratricopeptide repeat protein 39B OS=Homo sapiens OX=9606 GN=TTC39B PE=1 SV=4
Q8BYY4Tetratricopeptide repeat protein 39B OS=Mus musculus OX=10090 GN=Ttc39b PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001963 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10300
all species →		Iml2-TPR_39Iml2/Tetratricopeptide repeat protein 39RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019412
all species →		FamilyInclusion body clearance protein Iml2/Tetratricopeptide repeat protein 39Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31859
all species →		TETRATRICOPEPTIDE REPEAT PROTEIN 39 FAMILY MEMBERInterproscan

 Gene Ontology
No Gene Ontology signature was detected for amic_s0050.g88.t1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0050.g88.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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