Gene detail

Detailed information of amic_s0051.g41.t1 in Acropora microphthalma

Genomic Location: sc0000051_pilon:661841...682070
NR annotation: XP_044182328.1, angiopoietin-1 receptor-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

amic_s0051.g41.t1

cataaaaaaatcgctaccactgctactgctgtttctgattccatcgccttaggagcttaccaaaCCTCTTATAATATAGACTACTGCATAAAACATAATCGCAGTTATCGGCTGGAATCTCAAGAATGGTGTGAGCCTTGATAGACAATAGTTAGAAGTCCACTTTGGTTCAAAGCATGTTGTGATTAATGAGGCGAGACCAACAGGTTGGGGCAACAGTGATAGACATCTTATTCACAGATTGGATGGACACACACGAGTTAATCACCAGCAAAAGGAGGTGTCTGATGATTAGATAAGCACTTTTTCCTTTATTTTGTCGTCGTTTAATTTCATGAGAGAGTTTTTGCCCTTGAGCATGTCTCCTTCAGTAGCCTTTCAGAGCTGACAGACGCATGCTACAGAAACGCCATCATGACTCTACTAACGGACCGACACTTATACCGATTAGAGTAAATGTAAGCGAGGGAGGTGATGTGACTCTCAACTGCACGACGAAAGATAACGAACATACGTGGTCGCGGGAAGGGGAAGATCCTGTTGAAACGACGTCGCGGACTTTGGAAGATAAGGAATCCAAACTGAGGATTAAACCAGTCGCAGTTCGAGACAGTGGAATATACTATTGTGAGAATGAGGCAGTCAAATACATATTCAACGTTACAGTCAGCGTCTTTGTGAAAGTTGAGATGGTGATTAAAGTCCTTAGCTACAAATATACTCCAGAATTACAGAACAAATCCTCTCCTGTTTACAAAGAAACTGAACGGGACTTTACCAAAGTGATGGATAAAGTATTTCAAAATACGCCCGGCTATCAACGAACAGAAGTACTTAATTTCACGAAAGGAAGTGTAAAAGTGGATTTCAGAGTCATCATTGTTGTCGTGGCTACCGATCCCAAAAACGCATCATCTATAGTAGACAAGGGTGCCGAGACTGGACAAAAAGTAGTTCGTCAAGCTAAAAGTGGAGCTTTGCCAGGAATAAAAGTTGACCCAGTCGTTGTAGTTAAGGGTGCTCCTCCAGAGCCTCTAAACGTAACAGTCTCTGATAAGAAATCAAACCAACTTAGTGTTCAGTGGTTGCCTCCTGAAGAAACTATAGCCTTTGGAATTTATGGCTACATTGTGCAACACTGGCGATTTGCAACGAAGGATGTCTTTGCTAAGCACGTAAAGGCTCCAGAAGGAAAGAGCGAGTTCAGCTACCAGATTCAAAACCTGGAACCCGATACGTCTTACGTCATTCGCGTGGCTGCGAAAAACAACTATGGCAAGAATTTCAATGAAGGGACTGCTTATCAAACACTTCCTGCACGCAAACTCCTTGTGGTATTAGAGATCGCGGAAAATGGCAGCTTGTTAGAGTTTTTGAAAAGACATCGGAGCAAAAATGAAGGCTACGAGGGTGAAGGCACTTCACCTGGAGGTGCTTTACCTGAGGATATCAAGCTTAGGATTTCTCTTGACGTTGCAAGGGGCATGGCTCATCTGTCGAAACACAGGTGCATCCACCGAGATCTTGCAGCTCGAAATGTTTTGCTGGGGAAGAACTTAGTAGCAAAGGTGGCAGATTATGGGATGGCACGTGACGTTTATGAACAGCTGATGTATAAGAAGGAAACACAGGGAAAACTTCCTGTCAAATGGATGGCAATTGAATCATTGGAAACTTATGTCTTTACCCTAGAATCTGACGTTTGGTCGTATGGAGTGCTCCTATGGGAAATAGAGAGTGGAGGTGTCAAACCATATCCTGGGTTGACAGCTACCGAATTGATGTCAGAGTTGAGGAAAGGCTACCGACTGGAAAAGCCCAATGGATGTTCAGATGCAATGTACCAGTTGATGCGGAGTTGCTGGCACCCGAAACCAAAACTTCGACCTTCCTTCGACGAACTCGTGGAACGACTGGAGATATCTGTGTCTTCGTGACGACTACGGCGTGTGAAGTACTTTACCAAGTCCAGTTTACAACTCAAGTTGTTTTCCTCCTTGATAATTAGGAGTTCAAATTGTTTCCTTTGATATAGGAATTGCTGCATGCAAGCGTATATGCCACTGTGTTCATCTCTTGGAATCCAACGATTTACCTCATTAACGTATTGATGATTCGGAAAATTTAAAGCACTATAGCTCACGAGGAGCAAATACTACATAGATCTTCACTTGAAAATTCTGAGCAACATGGAACATGAGGAAACAATGCAACGTAGGTTGGCAGAGAGAAGTAATACTAGCCTTTAGTTACTTCATTAGCTAAGCTTAAGTTTGTGATGGATAAAACAGCTTTAGCTAG

Protein

Uniprot

Uniprot term	Description
Q91288	Fibroblast growth factor receptor 4 OS=Pleurodeles waltl OX=8319 GN=FGFR4 PE=2 SV=1
O42127	Fibroblast growth factor receptor 3 OS=Xenopus laevis OX=8355 GN=fgfr3 PE=2 SV=1
Q02763	Angiopoietin-1 receptor OS=Homo sapiens OX=9606 GN=TEK PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01390	SEA	SEA domain	Family	Interproscan
PF07714	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan
PF13927	Ig_3	Immunoglobulin domain	Domain	Interproscan
PF00041	fn3	Fibronectin type III domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008266	Active_site	Tyrosine-protein kinase, active site	Interproscan
IPR036364	Homologous_superfamily	SEA domain superfamily	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR000082	Domain	SEA domain	Interproscan
IPR020635	Domain	Tyrosine-protein kinase, catalytic domain	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR003961	Domain	Fibronectin type III	Interproscan
IPR001245	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR050122	Family	Receptor Tyrosine Kinase	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24416	TYROSINE-PROTEIN KINASE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0004713	Molecular Function	protein tyrosine kinase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0004714	Molecular Function	transmembrane receptor protein tyrosine kinase activity	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0007169	Biological Process	cell surface receptor protein tyrosine kinase signaling pathway	Interproscan
GO:0007275	Biological Process	multicellular organism development	Interproscan
GO:0033674	Biological Process	positive regulation of kinase activity	Interproscan
GO:0043235	Cellular Component	receptor complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K05121	TEK, TIE2, CD202; endothelial-specific receptor tyrosine kinase	EC:2.7.10.1	CD molecules	ko04090	deepkoala