Detailed information of amic_s0053.g4.t1 in Acropora microphthalma

Genomic Location: sc0000053_pilon:74366...83266
NR annotation: CAH3162342.1, unnamed protein product [Porites lobata]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000176 (this species only)
Ubiquitin familyE3|E3 activity|HECT · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13516
all species →		LRR_6Leucine Rich repeatRepeatInterproscan
PF00632
all species →		HECTHECT-domain (ubiquitin-transferase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000569
all species →		DomainHECT domainInterproscan
IPR032675
all species →		Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR001611
all species →		RepeatLeucine-rich repeatInterproscan
IPR051261
all species →		FamilyNOD-like receptor (NLR)Interproscan
IPR035983
all species →		Homologous_superfamilyHECT, E3 ligase catalytic domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24106
all species →		NACHT, LRR AND CARD DOMAINS-CONTAININGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004842
all species →		Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0035556
all species →		Biological Processintracellular signal transductionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0053.g4.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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