Gene detail

Detailed information of amic_s0053.g58.t3 in Acropora microphthalma

Genomic Location: sc0000053_pilon:1016511...1032035
NR annotation: CAH3022466.1, unnamed protein product [Porites evermanni]
Species Acropora microphthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

amic_s0053.g58.t3

ATGTTGATCGGTGGCTACCTGTTCCCAATTCCTGAAACACCGCGACTGGATGAACATCAGTGGTGGGGTAAAGGTCAGGAAACGGATCATGAAGAAGACACGTCTGTCAACCGAATGTACGTGAGTTTTTTCGAGGAAATTCTCACCGATCTCAAAGAAAGACTGTCTAAAACCTCCTTTTTTGAGAATCTTGAAGGCATCGATTGGGAATATGGCGTTAACCCTGAATACATGAAAGACGTTGTGGAATATTGGAAGACAAAATTTGATTGGCGTAAACAAGAGTCCATCTTGAACACTTACCCGCATTACAAGACTAAAATTAGTGGACTTGACATTCACTTTGTGCACCACAAAGCTGAACTCAAGGAAGGCCAGCAAGAGCTTGCCATTATGATGGTCCATGGTTGGCCAGGATCTTTCTATGAATTCTACCCAGTCATTCCAAAATTAATATCAGCATCAACAGATAAATATGCATTCTCAATTATCTGTCCTTCCATTCCTGGATACGGTTTGTCGGAAGCGCCACACAAACCTGGTTTCGACACATTTGCTGCTGCAAGAGTGTTTGCTAAGCTCATGGATCGCCTTGGTTACAAGTCATATTATCTGCAGGGAGGAGACTGGGGTAGTGCTATCACTAGTAAATTGGCAATTATGAATCCAAGTCAGATTAGAGGGCTTCATCTGAATCTGTTTTCTACACCCATCATGCTTTCGCCATTTGAATACATACAGGCAAAGCTGTTCTTTCCTGAGAAGGAGCAGAAGAAGTTATTTCCATTCAAAGATTTATTTTTCAAAGTGTTGGCTGAGTCAGGATATTTCCACCTACAAGTTACTCGGCCACACTCAGTAGGCTTGGCACTCAATGACTCGCCAGCCGGTCTTGCAGCATACATACTGGAGAAATTTGCCATGTGGAGTGGCTGTCAGACCATTGACACGGCAATGTGCCTGGAATCTAGCTTTTCTAAAGATGATCTGTTGACCAATGTGATGATTTACTGGGCAACACATTCAATAACATCTTCAATAAGATTGTACTATGAAGATATGCACAGTCCAAATGTTCAAATAGTTggaagGATTCCCATCACAGTTCCCACAGGCATTGCTGATTTTCCTCAGGAGCTTTTCCGAGTACCAGCACCATTTGCTTACACACGATTTGTTGACATAGTGCAGTTTTCTGAGATGCCTCGGGGTGGACATTTTGCTGCTTTTGAAGAGCCACAGTTGTTTGCCAATGATGTCATCAAGTTTATTGAGAAGGTTGAAAAGCTTTTTGGTGTTTCTGTCGCTGTGGTTTCCATTTTGATCGGTAGCTACCTGTTCCCAATTCCTGAAACACCGCGACTGGATGAACATCAGTGGTGGGGTAAAGGTCAGGAAACAGATCATGAAGAAGACACGTCTGTAAACCGAATGTACGTGAGTTTTTCCGAGGAAATTCTCACCGATCTCAAAGAAAGACTGTCTAAAACCCCCTTTTTTGAGAATCTTGAAGGCATCGATTGGGAATATGGCGTTAACCCTGAATACATGAAGGACGTTGTGGAATATTGGAAGACAAAATTTGATTGGCGTAAACAAGAGTCCATCTTGAACACTTACCCGCATTTCAAGACTAAAATCAGTGGACTTGACATTCACTTTGTGCACCACAAAGCTGAACTCAAGGAAGGCCAGAAGGAACTTGCCATTATGATGGTCCATGGTTGGCCAGGATCTTTCTATGAATTCTATCCAGTCATTCCGAAATTAATATCAGCATCAACAGATAAATATGCATTCTCAATTATCTGTCCTTCCATTCCTGGATACGGTTTGTCGGAAGCGCCACACAAACCTGGCTTTGACACGTTTGCTGCTGCAAGAGTCTTTGCTAAGCTTATGGATCGCCTTGGTTACCCATCATATTATCTCCAGGGAGGAGACTGGGGTAGTGCTATCACTAGTGCATGGGCAATTATGAATCCAAGTCAGATTAGAGGGCTTCATCTCAATATGTTTTCTACATCCATCATGTATTCGCCATTTGAATACATACAGGCAAAGCTGTTCTTTCCTGAGAAGGAGCAGAAGAAGATATTTCCAGTCAAGGATTTCTTTTTCAAAGTGTTGGCTGAGTCAGGATATTTTCACCTGCAAGCTACTCGGCCACACTCAGTAGGCTTGGCACTCAATGACTCCCCTGCCGGTCTTGCAGCATACATACTGGAGAAATTTGCCATGTGGAGTGGCTGTCAAACCACTGACACAGCAATGTGCCTGGAATCCTGCTTTTCTAAAGATGATCTGTTGACCAATGTGATGATTTACTGGGCAACACATTCAATAACATCTTCAATAAGATTGTACTATGAAGCTATCCACAGTCCCAATCTTCAAAGAGTTGGAAGGATTCCCATCACAGTTCCCACAGGTCTTGCTGATTTTCCTCACGAGCTTTTCCCAATACCAGCACCTTTTGCTCACAAACGATTTGTTGACATTGTGCAGTTTTCTGAGATGCCTCGGGGTGGACATTTTGCTGCTTTTGAAGAGCCACAGTTGTTTGCCAATGATGTCATCAAGTTTATTGAGAAGGTTGAAAAGCGTATTTCTTTGCAAAAAGCCGACACCATCATTAAATCTTAG

Transcript

amic_s0053.g58.t3

TGTAAGACGTTCTGCACTGTTTTCGTTGTAGTTTTTGGTGTTTCCATCGCTGTAGTTTCCATGTTGATCGGTGGCTACCTGTTCCCAATTCCTGAAACACCGCGACTGGATGAACATCAGTGGTGGGGTAAAGGTCAGGAAACGGATCATGAAGAAGACACGTCTGTCAACCGAATGTACGTGAGTTTTTTCGAGGAAATTCTCACCGATCTCAAAGAAAGACTGTCTAAAACCTCCTTTTTTGAGAATCTTGAAGGCATCGATTGGGAATATGGCGTTAACCCTGAATACATGAAAGACGTTGTGGAATATTGGAAGACAAAATTTGATTGGCGTAAACAAGAGTCCATCTTGAACACTTACCCGCATTACAAGACTAAAATTAGTGGACTTGACATTCACTTTGTGCACCACAAAGCTGAACTCAAGGAAGGCCAGCAAGAGCTTGCCATTATGATGGTCCATGGTTGGCCAGGATCTTTCTATGAATTCTACCCAGTCATTCCAAAATTAATATCAGCATCAACAGATAAATATGCATTCTCAATTATCTGTCCTTCCATTCCTGGATACGGTTTGTCGGAAGCGCCACACAAACCTGGTTTCGACACATTTGCTGCTGCAAGAGTGTTTGCTAAGCTCATGGATCGCCTTGGTTACAAGTCATATTATCTGCAGGGAGGAGACTGGGGTAGTGCTATCACTAGTAAATTGGCAATTATGAATCCAAGTCAGATTAGAGGGCTTCATCTGAATCTGTTTTCTACACCCATCATGCTTTCGCCATTTGAATACATACAGGCAAAGCTGTTCTTTCCTGAGAAGGAGCAGAAGAAGTTATTTCCATTCAAAGATTTATTTTTCAAAGTGTTGGCTGAGTCAGGATATTTCCACCTACAAGTTACTCGGCCACACTCAGTAGGCTTGGCACTCAATGACTCGCCAGCCGGTCTTGCAGCATACATACTGGAGAAATTTGCCATGTGGAGTGGCTGTCAGACCATTGACACGGCAATGTGCCTGGAATCTAGCTTTTCTAAAGATGATCTGTTGACCAATGTGATGATTTACTGGGCAACACATTCAATAACATCTTCAATAAGATTGTACTATGAAGATATGCACAGTCCAAATGTTCAAATAGTTggaagGATTCCCATCACAGTTCCCACAGGCATTGCTGATTTTCCTCAGGAGCTTTTCCGAGTACCAGCACCATTTGCTTACACACGATTTGTTGACATAGTGCAGTTTTCTGAGATGCCTCGGGGTGGACATTTTGCTGCTTTTGAAGAGCCACAGTTGTTTGCCAATGATGTCATCAAGTTTATTGAGAAGGTTGAAAAGCTTTTTGGTGTTTCTGTCGCTGTGGTTTCCATTTTGATCGGTAGCTACCTGTTCCCAATTCCTGAAACACCGCGACTGGATGAACATCAGTGGTGGGGTAAAGGTCAGGAAACAGATCATGAAGAAGACACGTCTGTAAACCGAATGTACGTGAGTTTTTCCGAGGAAATTCTCACCGATCTCAAAGAAAGACTGTCTAAAACCCCCTTTTTTGAGAATCTTGAAGGCATCGATTGGGAATATGGCGTTAACCCTGAATACATGAAGGACGTTGTGGAATATTGGAAGACAAAATTTGATTGGCGTAAACAAGAGTCCATCTTGAACACTTACCCGCATTTCAAGACTAAAATCAGTGGACTTGACATTCACTTTGTGCACCACAAAGCTGAACTCAAGGAAGGCCAGAAGGAACTTGCCATTATGATGGTCCATGGTTGGCCAGGATCTTTCTATGAATTCTATCCAGTCATTCCGAAATTAATATCAGCATCAACAGATAAATATGCATTCTCAATTATCTGTCCTTCCATTCCTGGATACGGTTTGTCGGAAGCGCCACACAAACCTGGCTTTGACACGTTTGCTGCTGCAAGAGTCTTTGCTAAGCTTATGGATCGCCTTGGTTACCCATCATATTATCTCCAGGGAGGAGACTGGGGTAGTGCTATCACTAGTGCATGGGCAATTATGAATCCAAGTCAGATTAGAGGGCTTCATCTCAATATGTTTTCTACATCCATCATGTATTCGCCATTTGAATACATACAGGCAAAGCTGTTCTTTCCTGAGAAGGAGCAGAAGAAGATATTTCCAGTCAAGGATTTCTTTTTCAAAGTGTTGGCTGAGTCAGGATATTTTCACCTGCAAGCTACTCGGCCACACTCAGTAGGCTTGGCACTCAATGACTCCCCTGCCGGTCTTGCAGCATACATACTGGAGAAATTTGCCATGTGGAGTGGCTGTCAAACCACTGACACAGCAATGTGCCTGGAATCCTGCTTTTCTAAAGATGATCTGTTGACCAATGTGATGATTTACTGGGCAACACATTCAATAACATCTTCAATAAGATTGTACTATGAAGCTATCCACAGTCCCAATCTTCAAAGAGTTGGAAGGATTCCCATCACAGTTCCCACAGGTCTTGCTGATTTTCCTCACGAGCTTTTCCCAATACCAGCACCTTTTGCTCACAAACGATTTGTTGACATTGTGCAGTTTTCTGAGATGCCTCGGGGTGGACATTTTGCTGCTTTTGAAGAGCCACAGTTGTTTGCCAATGATGTCATCAAGTTTATTGAGAAGGTTGAAAAGCGTATTTCTTTGCAAAAAGCCGACACCATCATTAAATCTTAGTGGCTTGGTGTTTGGACTGGCTGTCTTGATTTCAAGGCCGGAAAAAACATTTTTGTTTGAGTAACTGCATTTGTACTTCATACAATGTTAATTTTTTTTTTTAATAATTTGGAGTTATTCTTTTTTTCTCAGAAATAACTCAAAAATTTTTAACCCAATTTTGCCACAAAAAGTTTATCTCTTATTAGTGATTTTAAAGAGATGAAAAAAACACTGGGAAAAGTAACGATGTCCTGAAGAGTCTTCAATTGTGTCTTGTTGTGGTTGTGGTTGTTTTCTAAGTATTGCTGTGGAAGGTCGTCATTACATTTCGTTTCATCAAATCCTGGATAATATAATGGATGAATCAGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P07099	Epoxide hydrolase 1 OS=Homo sapiens OX=9606 GN=EPHX1 PE=1 SV=1
Q9D379	Epoxide hydrolase 1 OS=Mus musculus OX=10090 GN=Ephx1 PE=1 SV=2
P07687	Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003232 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06441 all species →	EHN	Epoxide hydrolase N terminus	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029058 all species →	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan
IPR000639 all species →	Family	Epoxide hydrolase-like	Interproscan
IPR010497 all species →	Domain	Epoxide hydrolase, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21661 all species →	EPOXIDE HYDROLASE 1-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004301 all species →	Molecular Function	epoxide hydrolase activity	Interproscan
GO:0097176 all species →	Biological Process	epoxide metabolic process	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0053.g58.t3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.