Detailed information of amic_s0054.g1.t1 in Acropora microphthalma

Genomic Location: sc0000054_pilon:10706...37014
NR annotation: XP_044173043.1, uncharacterized protein LOC114961802 [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P42664Embryonic protein UVS.2 OS=Xenopus laevis OX=8355 PE=2 SV=2
O70244Cubilin OS=Rattus norvegicus OX=10116 GN=Cubn PE=1 SV=2
Q8BUJ9Low-density lipoprotein receptor-related protein 12 OS=Mus musculus OX=10090 GN=Lrp12 PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000105 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00431
all species →		CUBCUB domainDomainInterproscan
PF13895
all species →		Ig_2Immunoglobulin domainDomainInterproscan
PF13855
all species →		LRR_8Leucine rich repeatRepeatInterproscan
PF01462
all species →		LRRNTLeucine rich repeat N-terminal domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000859
all species →		DomainCUB domainInterproscan
IPR032675
all species →		Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR035914
all species →		Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan
IPR036179
all species →		Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR009030
all species →		Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR050841
all species →		FamilyDevelopmental metalloproteases and endocytic receptorsInterproscan
IPR007110
all species →		DomainImmunoglobulin-like domainInterproscan
IPR003591
all species →		RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR001611
all species →		RepeatLeucine-rich repeatInterproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR003599
all species →		DomainImmunoglobulin subtypeInterproscan
IPR003598
all species →		DomainImmunoglobulin subtype 2Interproscan
IPR000372
all species →		DomainLeucine-rich repeat N-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24251
all species →		OVOCHYMASE-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0054.g1.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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