Detailed information of amic_s0054.g16.t1 in Acropora microphthalma

Genomic Location: sc0000054_pilon:234304...261165
NR annotation: XP_029203793.2, LOW QUALITY PROTEIN: uncharacterized protein LOC114967900 [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P28271Cytoplasmic aconitate hydratase OS=Mus musculus OX=10090 GN=Aco1 PE=1 SV=3
Q01059Cytoplasmic aconitate hydratase OS=Oryctolagus cuniculus OX=9986 GN=ACO1 PE=1 SV=1
P21399Cytoplasmic aconitate hydratase OS=Homo sapiens OX=9606 GN=ACO1 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002405 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00754
all species →
F5_F8_type_CF5/8 type C domainDomainInterproscan
PF00330
all species →
AconitaseAconitase family (aconitate hydratase)FamilyInterproscan
PF07699
all species →
Ephrin_rec_likeTyrosine-protein kinase ephrin type A/B receptor-like DomainInterproscan
PF00694
all species →
Aconitase_CAconitase C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001030
all species →
DomainAconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domainInterproscan
IPR000421
all species →
DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR015928
all species →
Homologous_superfamilyAconitase/3-isopropylmalate dehydratase, swivelInterproscan
IPR009030
all species →
Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR006249
all species →
FamilyAconitase/Iron-responsive element-binding protein 2Interproscan
IPR008979
all species →
Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR015931
all species →
Homologous_superfamilyAconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3Interproscan
IPR006212
all species →
RepeatFurin-like repeatInterproscan
IPR018136
all species →
Binding_siteAconitase family, 4Fe-4S cluster binding siteInterproscan
IPR011641
all species →
DomainTyrosine-protein kinase ephrin type A/B receptor-likeInterproscan
IPR001368
all species →
DomainTNFR/NGFR cysteine-rich regionInterproscan
IPR000573
all species →
DomainAconitase A/isopropylmalate dehydratase small subunit, swivel domainInterproscan
IPR036008
all species →
Homologous_superfamilyAconitase, iron-sulfur domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11670
all species →
ACONITASE/IRON-RESPONSIVE ELEMENT FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003994
all species →
Molecular Functionaconitate hydratase activityInterproscan
GO:0005739
all species →
Cellular ComponentmitochondrionInterproscan
GO:0005829
all species →
Cellular ComponentcytosolInterproscan
GO:0006099
all species →
Biological Processtricarboxylic acid cycleInterproscan
GO:0006101
all species →
Biological Processcitrate metabolic processInterproscan
GO:0030350
all species →
Molecular Functioniron-responsive element bindingInterproscan
GO:0051539
all species →
Molecular Function4 iron, 4 sulfur cluster bindingInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0054.g16.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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